Evidence map›Paper›PMID 32158963›Full record

ArticleInvestigative and clinical urology2020

Targeted next-generation sequencing for locally advanced prostate cancer in the Korean population.

Jungyo Suh, Chang Wook Jeong, Seongmin Choi, Ja Hyeon Ku, Hyeon Hoe Kim, Kwang Soo Kim, Cheol Kwak

Open access · diamondAbstract read
In one paragraph

Article in Investigative and clinical urology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jungyo SuhDepartment of Urology, Seoul National University College of Medicine, Seoul, Korea.ORCID 0000-0002-3867-4778
Chang Wook JeongDepartment of Urology, Seoul National University College of Medicine, Seoul, Korea.ORCID 0000-0002-2200-5019
Seongmin ChoiDepartment of Biomedical Research, Biomedical Research Institute, Seoul National University Hospital, Seoul, Korea.ORCID 0000-0001-9722-1800
Ja Hyeon KuDepartment of Urology, Seoul National University College of Medicine, Seoul, Korea.ORCID 0000-0002-0391-2342
Hyeon Hoe KimDepartment of Urology, Seoul National University College of Medicine, Seoul, Korea.ORCID 0000-0001-6600-4539
Kwang Soo KimDepartment of Biomedical Research, Biomedical Research Institute, Seoul National University Hospital, Seoul, Korea.ORCID 0000-0002-4586-5062
Cheol KwakDepartment of Urology, Seoul National University College of Medicine, Seoul, Korea.ORCID 0000-0002-1987-2111
Seoul National University · KRSeoul National University Hospital · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: This study aimed to evaluate the feasibility of pan-cancer panel analysis for locally advanced prostate cancer in the Korean population. Materials and Methods: We analyzed 20 patients with locally advanced prostate cancer who underwent radical prostatectomy. A pan-cancer panel (1.9 Mbp) developed by Seoul National University Hospital (SNUH), composed of 183 target genes, 23 fusion genes, and 45 drug target regions was used for this analysis. We compared the SNUH pan-cancer panel results with The Cancer Genome Atlas (TCGA) database to search for different mutations in the Korean population. Clinical data were analyzed with univariate and multivariate analysis, and p-values <0.05 were considered statistically significant. Kaplan-Meier curve and log-rank tests were performed to evaluate survival. Results: The average age of the patients and initial prostate-specific antigen values were 69.3±7.8 years and 66.3±16.9 ng/dL, respectively. Average sequencing depth was 574.5±304.1×. Ninety-nine genetic mutations and 5 fusions were detected. Conclusions: The pan-cancer panel comprising genes related to prostate cancer is a useful tool for evaluating genetic alterations in locally advanced prostate cancers. Our results suggest that the

Indexed as

High-Throughput Nucleotide SequencingSequence Analysis, DNAAgedDNA, NeoplasmFeasibility StudiesHumansMaleMiddle AgedNeoplasm Recurrence, LocalProstatectomyProstatic NeoplasmsRepublic of KoreaRetrospective StudiesDNA, NeoplasmGeneticsProstate-specific antigenProstatic neoplasmsRecurrence

Identifiers

PMID32158963
PMCPMC7052421
OpenAlexW2993598912

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.