Evidence map›Paper›PMID 32159970›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2020

TBK1 regulates YAP/TAZ and fibrogenic fibroblast activation.

Aja Aravamudhan, Andrew J Haak, Kyoung Moo Choi, Jeffrey A Meridew, Nunzia Caporarello, Dakota L Jones, Qi Tan, Giovanni Ligresti, Daniel J Tschumperlin

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 40 citations in OpenAlex.

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  14. Dopamine Receptor D1 Is Exempt from Transforming Growth FactorThe Journal of pharmacology and experimental therapeutics · 2023
    Article
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  20. Regulator of G protein signaling 2 inhibits GαThe Journal of biological chemistry · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Aja AravamudhanDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, Minnesota.
Andrew J HaakDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, Minnesota.
Kyoung Moo ChoiDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, Minnesota.
Jeffrey A MeridewDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, Minnesota.
Nunzia CaporarelloDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, Minnesota.
Dakota L JonesDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, Minnesota.
Qi TanDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, Minnesota.
Giovanni LigrestiDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, Minnesota.
Daniel J TschumperlinDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, Minnesota.
Mayo Clinic · US

Funding

Mechanobiology of Lung FibrosisR01HL092961 · NHLBI · MAYO CLINIC ROCHESTER · PI Daniel J. Tschumperlin · 2009 to 2026
$8.0M
Interdisciplinary Training in Lung Physiology and Biomedical EngineeringT32HL105355 · NHLBI · MAYO CLINIC ROCHESTER · PI PRAKASH, Y. S., SIECK, GARY C. · 2012 to 2021
$3.9M
Targeting matrix stiffness in lung and liver fibrosisR01HL133320 · NHLBI · MAYO CLINIC ROCHESTER · PI SHAH, VIJAY H., TSCHUMPERLIN, DANIEL J. · 2016 to 2019
$2.2M
NHLBI NIH HHS R01 HL092961NHLBI NIH HHS R01 HL133320NHLBI NIH HHS T32 HL105355
6 · The paper itself

Abstract

Idiopathic pulmonary fibrosis (IPF) results in scarring of the lungs by excessive extracellular matrix (ECM) production. Resident fibroblasts are the major cell type involved in ECM deposition. The biochemical pathways that facilitate pathological fibroblast activation leading to aberrant ECM deposition are not fully understood. Tank binding protein kinase-1 (TBK1) is a kinase that regulates multiple signaling pathways and was recently identified as a candidate regulator of fibroblast activation in a large-scale small-interfering RNA (siRNA) screen. To determine the effect of TBK1 on fibroblast activation, TBK1 was inhibited pharmacologically (MRT-68601) and genetically (siRNA) in normal and IPF human lung fibroblasts. Reducing the activity or expression of TBK1 led to reduction in α-smooth muscle actin stress fiber levels by 40-60% and deposition of ECM components collagen I and fibronectin by 50% in TGF-β-stimulated normal and IPF fibroblasts. YAP and TAZ are homologous mechanoregulatory profibrotic transcription cofactors known to regulate fibroblast activation. TBK1 knockdown or inhibition decreased the total and nuclear protein levels of YAP/TAZ. Additionally, low cell-cell contact and increased ECM substrate stiffness augmented the phosphorylation and activation of TBK1, consistent with cues that regulate YAP/TAZ. The action of TBK1 toward YAP/TAZ activation was independent of LATS1/2 and canonical downstream TBK1 signaling mediator IRF3 but dependent on proteasomal machinery of the cell. This study identifies TBK1 as a fibrogenic activator of human pulmonary fibroblasts, suggesting TBK1 may be a novel therapeutic target in pulmonary fibrosis.

Indexed as

ActinsAdaptor Proteins, Signal TransducingCell CommunicationCollagen Type IExtracellular MatrixFibroblastsFibronectinsGene Expression RegulationHumansIdiopathic Pulmonary FibrosisInterferon Regulatory Factor-3LungPrimary Cell CultureProteasome Endopeptidase ComplexProtein Kinase InhibitorsProtein Serine-Threonine KinasesACTA2 protein, humanActinsAdaptor Proteins, Signal TransducingCollagen Type IFibronectinsInterferon Regulatory Factor-3IRF3 protein, humanLATS1 protein, humanLATS2 protein, humanProteasome Endopeptidase ComplexProtein Kinase InhibitorsProtein Serine-Threonine KinasesRNA, Small InterferingTBK1 protein, humanTrans-ActivatorsTranscriptional Coactivator with PDZ-Binding Motif ProteinsTranscription FactorsTransforming Growth Factor betaTumor Suppressor ProteinsWWTR1 protein, humanYAP1 protein, humanYAP-Signaling Proteinsextracellular matrixfibroblastfibrosismechanosignalingYAP/TAZ

Identifiers

PMID32159970
PMCPMC7272740
OpenAlexW3012423443

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.