Evidence map›Paper›PMID 32224912›Full record

ReviewGenes2020

DNA Methylation in the Diagnosis of Monogenic Diseases.

Flavia Cerrato, Angela Sparago, Francesca Ariani, Fulvia Brugnoletti, Luciano Calzari, Fabio Coppedè, Alessandro De Luca, Cristina Gervasini, Emiliano Giardina, Fiorella Gurrieri and 13 more

Open access · goldAbstract readReview
In one paragraph

Review in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
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  6. Article
  7. Article
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  9. Article
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  11. Review
  12. Article
  13. Review
  14. Epigenetic Alterations in Inborn Errors of Immunity.Journal of clinical medicine · 2022
    Review
  15. Article
  16. How to Translate DNA Methylation Biomarkers Into Clinical Practice.Frontiers in cell and developmental biology · 2022
    Review
  17. Severe developmental expressive language disorder due to a frameshift mutation in exon 18 of SRCAP gene, far away from the mutational hotspot in exons 33 and 34 associated to the Floating-Harbor syndrome.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2021
    Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 10 institutions in 2 countries.

Flavia CerratoDipartimento di Scienze e Tecnologie Ambientali Biologiche e Farmaceutiche, Università degli Studi della Campania "Luigi Vanvitelli", 81100 Caserta, Italy.ORCID 0000-0003-3794-3021
Angela SparagoDipartimento di Scienze e Tecnologie Ambientali Biologiche e Farmaceutiche, Università degli Studi della Campania "Luigi Vanvitelli", 81100 Caserta, Italy.
Francesca ArianiGenetica Medica, Università di Siena, 53100 Siena, Italy.
Fulvia BrugnolettiUOC Genetica Medica, Fondazione Policlinico Universitario A. Gemelli IRCCS, 00168 Rome, Italy.
Luciano CalzariLaboratorio di Citogenetica Medica e Genetica Molecolare, Centro di Ricerche e Tecnologie Biomediche IRCCS, Istituto Auxologico italiano, 20149 Milan, Italy.ORCID 0000-0003-4283-0988
Fabio CoppedèDipartimento di Ricerca Traslazionale e delle Nuove tecnologie in Medicina e Chirurgia, Laboratorio di Genetica Medica, Università di Pisa, 56126 Pisa, Italy.
Alessandro De LucaDivisione di Genetica Medica, Fondazione IRCCS Casa Sollievo della Sofferenza, San Giovanni Rotondo, 71013 Foggia, Italy.ORCID 0000-0002-4408-8062
Cristina GervasiniGenetica Medica, Dipartimento di Scienze della Salute, Università degli studi di Milano, 20146 Milan, Italy.
Emiliano GiardinaLaboratorio di Medicina Genomica UILDM, Fondazione Santa Lucia, 00179 Rome, Italy.
Fiorella GurrieriUOC Genetica Medica, Fondazione Policlinico Universitario A. Gemelli IRCCS, 00168 Rome, Italy.
Cristiana Lo NigroLaboratori Centrali, EO Ospedali Galliera, 16128 Genova, Italy.
Giuseppe MerlaDivisione di Genetica Medica, Fondazione IRCCS Casa Sollievo della Sofferenza, San Giovanni Rotondo, 71013 Foggia, Italy.ORCID 0000-0001-5078-928X
Monica MiozzoDipartimento di Fisiopatologia Medico-chirurgica e dei Trapianti, Genetica Medica, Università degli Studi di Milano, 20122 Milan, Italy.
Silvia RussoLaboratorio di Citogenetica Medica e Genetica Molecolare, Centro di Ricerche e Tecnologie Biomediche IRCCS, Istituto Auxologico italiano, 20149 Milan, Italy.ORCID 0000-0002-5893-0193
Eugenio SangiorgiUOC Genetica Medica, Fondazione Policlinico Universitario A. Gemelli IRCCS, 00168 Rome, Italy.
Silvia M SirchiaGenetica Medica, Dipartimento di Scienze della Salute, Università degli studi di Milano, 20146 Milan, Italy.
Gabriella Maria SqueoDivisione di Genetica Medica, Fondazione IRCCS Casa Sollievo della Sofferenza, San Giovanni Rotondo, 71013 Foggia, Italy.
Silvia TabanoDipartimento di Fisiopatologia Medico-chirurgica e dei Trapianti, Genetica Medica, Università degli Studi di Milano, 20122 Milan, Italy.ORCID 0000-0002-5260-6691
Elisabetta TabolacciFondazione Policlinico Universitario A. Gemelli IRCCS, Istituto di Medicina Genomica, Università Cattolica del Sacro Cuore, 00168 Rome, Italy.ORCID 0000-0002-4707-2242
Isabella TorrenteDivisione di Genetica Medica, Fondazione IRCCS Casa Sollievo della Sofferenza, San Giovanni Rotondo, 71013 Foggia, Italy.
Maurizio GenuardiUOC Genetica Medica, Fondazione Policlinico Universitario A. Gemelli IRCCS, 00168 Rome, Italy.
Giovanni NeriFondazione Policlinico Universitario A. Gemelli IRCCS, Istituto di Medicina Genomica, Università Cattolica del Sacro Cuore, 00168 Rome, Italy.
Andrea RiccioDipartimento di Scienze e Tecnologie Ambientali Biologiche e Farmaceutiche, Università degli Studi della Campania "Luigi Vanvitelli", 81100 Caserta, Italy.ORCID 0000-0001-7990-3576
Università Cattolica del Sacro Cuore · ITCasa Sollievo della Sofferenza · ITUniversity of Milan · ITUniversity of Campania "Luigi Vanvitelli" · ITIRCCS Istituto Auxologico Italiano · ITEnte Ospedaliero Ospedali Galliera · ITUniversità Campus Bio-Medico · ITUniversity of Pisa · ITUniversity of Rome Tor Vergata · ITUniversity of Siena · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA methylation in the human genome is largely programmed and shaped by transcription factor binding and interaction between DNA methyltransferases and histone marks during gamete and embryo development. Normal methylation profiles can be modified at single or multiple loci, more frequently as consequences of genetic variants acting in cis or in trans, or in some cases stochastically or through interaction with environmental factors. For many developmental disorders, specific methylation patterns or signatures can be detected in blood DNA. The recent use of high-throughput assays investigating the whole genome has largely increased the number of diseases for which DNA methylation analysis provides information for their diagnosis. Here, we review the methylation abnormalities that have been associated with mono/oligogenic diseases, their relationship with genotype and phenotype and relevance for diagnosis, as well as the limitations in their use and interpretation of results.

Indexed as

DNA MethylationEpigenomicsGenome, HumanGenetic Diseases, InbornHumansPhenotypedevelopmental delay/intellectual disability disordersDNA methylationepi-signaturesgenetic testinghereditary tumorshigh-throughput analysisimprinting disordersneuromuscular diseasesprenatal diagnosis

Identifiers

PMID32224912
PMCPMC7231024
OpenAlexW3013497394

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.