Evidence map›Paper›PMID 32235747›Full record

ArticleDiagnostics (Basel, Switzerland)2020

GRB10 and E2F3 as Diagnostic Markers of Osteoarthritis and Their Correlation with Immune Infiltration.

Ya-Jun Deng, En-Hui Ren, Wen-Hua Yuan, Guang-Zhi Zhang, Zuo-Long Wu, Qi-Qi Xie

Abstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ya-Jun DengKey Laboratory of Orthopaedics Disease of Gansu Province, Lanzhou University, Lanzhou 730000, China.ORCID 0000-0003-0953-6525
En-Hui RenKey Laboratory of Orthopaedics Disease of Gansu Province, Lanzhou University, Lanzhou 730000, China.
Wen-Hua YuanKey Laboratory of Orthopaedics Disease of Gansu Province, Lanzhou University, Lanzhou 730000, China.ORCID 0000-0001-9303-5832
Guang-Zhi ZhangKey Laboratory of Orthopaedics Disease of Gansu Province, Lanzhou University, Lanzhou 730000, China.ORCID 0000-0003-3193-0297
Zuo-Long WuKey Laboratory of Orthopaedics Disease of Gansu Province, Lanzhou University, Lanzhou 730000, China.ORCID 0000-0002-8924-7311
Qi-Qi XieKey Laboratory of Orthopaedics Disease of Gansu Province, Lanzhou University, Lanzhou 730000, China.ORCID 0000-0003-4099-5287

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aimed to find potential diagnostic markers for osteoarthritis (OA) and analyze the role of immune cells infiltration in this pathology. We used OA datasets from the Gene Expression Omnibus database. First, R software was used to identify differentially expressed genes (DEGs) and perform functional correlation analysis. Then least absolute shrinkage and selection operator (LASSO) logistic regression and support vector machine-recursive feature elimination algorithms were used to screen and verify the diagnostic markers of OA. Finally, CIBERSORT was used to evaluate the infiltration of immune cells in OA tissues, and the correlation between diagnostic markers and infiltrating immune cells was analyzed. A total of 458 DEGs were screened in this study. GRB10 and E2F3 (AUC = 0.962) were identified as diagnostic markers of OA. Immune cell infiltration analysis found that resting mast cells, T regulatory cells, CD4 memory resting T cells, activated NK cells, and eosinophils may be involved in the OA process. In addition, GRB10 was correlated with NK resting cells, naive CD4 + T cells, and M1 macrophages, while E2F3 was correlated with resting mast cells. In conclusion, GRB10 and E2F3 can be used as diagnostic markers of osteoarthritis, and immune cell infiltration plays an important role in the occurrence and progression of OA.

Indexed as

CIBERSORTdiagnosticGene Expression Omnibusimmune cellsosteoarthritis

Identifiers

PMID32235747
PMCPMC7151213

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.