Evidence map›Paper›PMID 32241909›Full record

ArticleThe Journal of biological chemistry2020

Sterile α-motif domain requirement for cellular signaling and survival.

Suhita Ray, Linda Chee, Daniel R Matson, Nick Y Palermo, Emery H Bresnick, Kyle J Hewitt

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  6. Review
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  8. Article
  9. Sticky, Adaptable, and Many-sided: SAM protein versatility in normal and pathological hematopoietic states.BioEssays : news and reviews in molecular, cellular and developmental biology · 2023
    Review
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Suhita RayDepartment of Genetics, Cell Biology and Anatomy, Fred and Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, Nebraska 68198.ORCID 0000-0003-0887-6640
Linda CheeDepartment of Genetics, Cell Biology and Anatomy, Fred and Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, Nebraska 68198.
Daniel R MatsonUniversity of Wisconsin-Madison Blood Research Program, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin 53705.ORCID 0000-0003-1430-3128
Nick Y PalermoHolland Computing Center, University of Nebraska-Lincoln, Lincoln, Nebraska 68588.
Emery H BresnickUniversity of Wisconsin-Madison Blood Research Program, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin 53705.
Kyle J HewittDepartment of Genetics, Cell Biology and Anatomy, Fred and Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, Nebraska 68198 kyle.hewitt@unmc.edu.ORCID 0000-0003-1946-625X
University of Nebraska Medical Center · USUniversity of Wisconsin–Madison · USUniversity of Nebraska–Lincoln · US

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Justine Yang Bruce · 1985 to 2026
$142.6M
Target Validation CoreP20GM121316 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Subramanian Perinkulam Ramanathan · 2018 to 2026
$23.5M
RESEARCH TRAINING IN HEMATOLOGYT32HL007899 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Jane Ellen Churpek · 1998 to 2026
$8.2M
Transcriptional Control of Hemoglobin Synthesis and Erythrocyte DevelopmentR01DK050107 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI Emery H. Bresnick · 1996 to 2026
$6.1M
Transcriptional Control of Hemoglobin SynthesisR37DK050107 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI BRESNICK, EMERY H · 2011 to 2020
$3.5M
Mechanisms of a GATA Factor-Dependent Hematopoietic Signaling PathwayK01DK113117 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI HEWITT, KYLE J · 2017 to 2018
$199k
NCI NIH HHS P30 CA014520NHLBI NIH HHS T32 HL007899NIDDK NIH HHS K01 DK113117NIDDK NIH HHS R01 DK050107NIDDK NIH HHS R37 DK050107NIGMS NIH HHS P20 GM121316
6 · The paper itself

Abstract

Hundreds of sterile α-motif (SAM) domains have predicted structural similarities and are reported to bind proteins, lipids, or RNAs. However, the majority of these domains have not been analyzed functionally. Previously, we demonstrated that a SAM domain-containing protein, SAMD14, promotes SCF/proto-oncogene c-Kit (c-Kit) signaling, erythroid progenitor function, and erythrocyte regeneration. Deletion of a Samd14 enhancer (Samd14-Enh), occupied by GATA2 and SCL/TAL1 transcription factors, reduces SAMD14 expression in bone marrow and spleen and is lethal in a hemolytic anemia mouse model. To rigorously establish whether Samd14-Enh deletion reduces anemia-dependent c-Kit signaling by lowering SAMD14 levels, we developed a genetic rescue assay in murine Samd14-Enh

Indexed as

Enhancer Elements, GeneticGene Expression RegulationSignal TransductionAmino Acid MotifsAnemia, HemolyticAnimalsCytoskeletal ProteinsMiceMice, Mutant StrainsProtein DomainsProteinsProto-Oncogene Proteins c-kitCytoskeletal ProteinsProteinsProto-Oncogene Proteins c-kitSamd14 protein, mouseerythropoiesishemolytic anemiaprotein motifproto-oncogene c-Kit (c-Kit)receptor tyrosine kinasestem cell factor (SCF)sterile α-motifsterile α-motif domain containing 14 (SAMD14)stressstructure–function

Identifiers

PMID32241909
PMCPMC7242717
OpenAlexW3014109989

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.