Evidence map›Paper›PMID 32277007›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2020

Association Analysis of Driver Gene-Related Genetic Variants Identified Novel Lung Cancer Susceptibility Loci with 20,871 Lung Cancer Cases and 15,971 Controls.

Yuzhuo Wang, Olga Y Gorlova, Ivan P Gorlov, Meng Zhu, Juncheng Dai, Demetrius Albanes, Stephen Lam, Adonina Tardon, Chu Chen, Gary E Goodman and 33 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

43 authors at 20 institutions in 13 countries.

Yuzhuo Wang *Department of Epidemiology, International Joint Research Center on Environment and Human Health, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.
Olga Y Gorlova *Department of Biomedical Data Science, Geisel School of Medicine at Dartmouth, Lebanon, New Hampshire.
Ivan P GorlovDepartment of Biomedical Data Science, Geisel School of Medicine at Dartmouth, Lebanon, New Hampshire.
Meng ZhuDepartment of Epidemiology, International Joint Research Center on Environment and Human Health, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.ORCID 0000-0001-5122-1733
Juncheng DaiDepartment of Epidemiology, International Joint Research Center on Environment and Human Health, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.
Demetrius AlbanesDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland.
Stephen LamDepartment of Integrative Oncology, British Columbia Cancer Agency, Vancouver, British Columbia, Canada.
Adonina TardonDepartment of Public Health IUOPA, University of Oviedo, ISPA and CIBERESP, Oviedo, Spain.ORCID 0000-0001-5150-1209
Chu ChenProgram in Epidemiology, Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Gary E GoodmanPublic Health Sciences Division, Swedish Cancer Institute, Seattle, Washington.
Stig E BojesenDepartment of Clinical Biochemistry, Copenhagen University Hospital, Copenhagen, Denmark.
Maria Teresa LandiNational Cancer Institute, Bethesda, Maryland.
Mattias JohanssonGenetic Epidemiology Group, International Agency for Research on Cancer, Lyon, France.ORCID 0000-0002-3116-5081
Angela RischUniversity of Salzburg, Department of Biosciences, Allergy-Cancer-BioNano Research Centre, Salzburg, Austria.ORCID 0000-0002-8026-5505
Heunz-Erich WichmannInstitute of Medical Informatics, Biometry and Epidemiology, Chair of Epidemiology, Ludwig Maximilians University, Munich, Bavaria, Germany.
Heike BickebollerDepartment of Genetic Epidemiology, University Medical Center Goettingen, Goettingen, Germany.
David C ChristianiDepartments of Environmental Health and Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts.ORCID 0000-0002-0301-0242
Gad RennertTechnion Faculty of Medicine, Carmel Medical Center, Haifa, Israel.ORCID 0000-0002-8512-068X
Susanne M ArnoldMarkey Cancer Center, University of Kentucky, Lexington, Kentucky.
Paul BrennanGenetic Epidemiology Group, International Agency for Research on Cancer, Lyon, France.ORCID 0000-0002-0518-8714
John K FieldMolecular and Clinical Cancer Medicine, Roy Castle Lung Cancer Research Programme, The University of Liverpool Institute of Translational Medicine, Liverpool, United Kingdom.ORCID 0000-0003-3951-6365
Sanjay SheteDepartment of Epidemiology, The University of Texas, MD Anderson Cancer Center, Houston, Texas.
Loïc Le MarchandEpidemiology Program, University of Hawai'i Cancer Center, Honolulu, Hawai'i.
Olle MelanderClinical Sciences, Lund University, Lund, Sweden.
Hans BrunnstromClinical Sciences, Lund University, Lund, Sweden.ORCID 0000-0001-7402-138X
Geoffrey LiuPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.ORCID 0000-0002-2603-7296
Rayjean J HungProsseman Centre for Population Health Research, Lunenfeld-Tanenbaum Research Institute, Sinai Health System, Toronto, Ontario, Canada.ORCID 0000-0002-4486-7496
Angeline S AndrewDepartment of Neurology, Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire.
Lambertus A KiemeneyDepartment for Health Evidence, Radboud University Medical Center, Nijmegen, the Netherlands.ORCID 0000-0002-2368-1326
Shanbeh ZienolddinyNational Institute of Occupational Health (STAMI), Oslo, Norway.
Kjell GrankvistDepartment of Medical Biosciences, Umeå University, Umea, Sweden.ORCID 0000-0003-4289-2097
Mikael JohanssonDepartment of Radiation Sciences, Umeå University, Umea, Sweden.ORCID 0000-0003-4182-8923
Neil E CaporasoDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, Maryland.
Penella J WollAcademic Unit of Clinical Oncology, University of Sheffield, Sheffield, United Kingdom.ORCID 0000-0002-1118-0831
Philip LazarusDepartment of Pharmaceutical Sciences, College of Pharmacy and Pharmaceutical Sciences, Washington State University, Spokane, Washington.
Matthew B SchabathDepartment of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.ORCID 0000-0003-3241-3216
Melinda C AldrichDepartment of Medicine (Division of Genetic Medicine), Vanderbilt University Medical Center, Nashville, Tennessee.
Victoria L StevensBehavioral and Epidemiology Research Group, American Cancer Society, Atlanta, Georgia.ORCID 0000-0003-0259-4407
Hongxia MaDepartment of Epidemiology, International Joint Research Center on Environment and Human Health, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.
Guangfu JinDepartment of Epidemiology, International Joint Research Center on Environment and Human Health, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.
Zhibin HuDepartment of Epidemiology, International Joint Research Center on Environment and Human Health, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.
Christopher I AmosDepartment of Medicine, Epidemiology Section, Institute for Clinical and Translational Research, Baylor Medical College, Houston, Texas. hbshen@njmu.edu.cn chris.amos@bcm.edu.ORCID 0000-0002-8540-7023
Hongbing ShenDepartment of Epidemiology, International Joint Research Center on Environment and Human Health, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China. hbshen@njmu.edu.cn chris.amos@bcm.edu.
Nanjing Health and Health Commission · CNCentre international de recherche sur le cancer · FRNational Cancer Institute · USDartmouth College · USLund University · SEAmerican Cancer Society · USBC Cancer Agency · CACancer Center of Hawaii · USCarmel Medical Center · ILDartmouth–Hitchcock Medical Center · USFred Hutch Cancer Center · USGerman Cancer Research Center · DELunenfeld-Tanenbaum Research Institute · CAMarkey Cancer Center · USMassachusetts Department of Public Health · USMoffitt Cancer Center · USNational Institute of Occupational Health · NONephrologisches Zentrum Goettingen · DEPrincess Margaret Cancer Centre · CARadboud University Nijmegen · NL

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI John L. Cleveland · 1998 to 2026
$93.5M
Translating Molecular and Clinical Data to Population Lung Cancer Risk AssessmentU19CA203654 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Rayjean J. Hung · 2017 to 2026
$23.7M
THE CAROTENE AND RETINOL EFFICACY TRIAL (CARET)U01CA063673 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GOODMAN, GARY E · 1994 to 2006
$13.0M
The Boston Lung Cancer Survival CohortU01CA209414 · NCI · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI David C Christiani · 2017 to 2026
$12.2M
SPORE in Lung CancerP50CA119997 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI GABRILOVICH, DMITRY I · 2008 to 2012
$11.0M
Statistical Methods for Analysis of Massive Genetic and Genomic Data in Cancer ResearchR35CA197449 · NCI · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI XIHONG LIN · 2015 to 2026
$10.9M
Transdisciplinary Research in Cancer of the Lung (TRICL)U19CA148127 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI AMOS, CHRISTOPHER I., LE MARCHAND, LOIC · 2010 to 2014
$10.9M
Infrastructure Support and Pilot Tissue Collection for the CARET BiorepositoryU01CA167462 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI NEUHOUSER, MARIAN L · 2018 to 2022
$2.9M
INFRASRUCTURE SUPPORT AND DATA ENHANCEMENTS FOR THE CARET BIOREPOSITORYUM1CA167462 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GOODMAN, GARY E · 2013 to 2017
$2.8M
NCI NIH HHS P30 CA076292NCI NIH HHS P50 CA119997NCI NIH HHS R35 CA197449NCI NIH HHS U01 CA063673NCI NIH HHS U01 CA167462NCI NIH HHS U01 CA209414NCI NIH HHS U19 CA148127NCI NIH HHS U19 CA203654NCI NIH HHS UM1 CA167462World Health Organization 001
6 · The paper itself

Abstract

backgroundA substantial proportion of cancer driver genes (CDG) are also cancer predisposition genes. However, the associations between genetic variants in lung CDGs and the susceptibility to lung cancer have rarely been investigated.

methodsWe selected expression-related single-nucleotide polymorphisms (eSNP) and nonsynonymous variants of lung CDGs, and tested their associations with lung cancer risk in two large-scale genome-wide association studies (20,871 cases and 15,971 controls of European descent). Conditional and joint association analysis was performed to identify independent risk variants. The associations of independent risk variants with somatic alterations in lung CDGs or recurrently altered pathways were investigated using data from The Cancer Genome Atlas (TCGA) project.

resultsWe identified seven independent SNPs in five lung CDGs that were consistently associated with lung cancer risk in discovery (

conclusionsGenetic variants can regulate functions of lung CDGs and influence lung cancer susceptibility. IMPACT: Our findings might help unravel biological mechanisms underlying lung cancer susceptibility.

Indexed as

Case-Control StudiesFemaleGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyHumansLung NeoplasmsMaleMiddle Aged

Identifiers

PMID32277007
PMCPMC8120681
OpenAlexW3016186797

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.