Evidence map›Paper›PMID 32290826›Full record

ArticleBMC ophthalmology2020

Identification of potential molecular targets associated with proliferative diabetic retinopathy.

Dewang Shao, Shouzhi He, Zi Ye, Xiaoquan Zhu, Wei Sun, Wei Fu, Tianju Ma, Zhaohui Li

Open access · goldAbstract read
In one paragraph

Article in BMC ophthalmology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. FTO-modulated mJournal of translational medicine · 2026
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  5. Review
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  10. MicroRNA-15b Targets VEGF and Inhibits Angiogenesis in Proliferative Diabetic Retinopathy.The Journal of clinical endocrinology and metabolism · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Dewang ShaoDepartment of Ophthalmology, The Chinese People's Liberation Army General Hospital, No. 28 Fuxing Road, Haidian District, Beijing, 100853, China. dewangshao@sina.com.
Shouzhi HeDepartment of Ophthalmology, The Chinese People's Liberation Army General Hospital, No. 28 Fuxing Road, Haidian District, Beijing, 100853, China.
Zi YeDepartment of Ophthalmology, The Chinese People's Liberation Army General Hospital, No. 28 Fuxing Road, Haidian District, Beijing, 100853, China.
Xiaoquan ZhuDepartment of Ophthalmology, Air Force Medical Center, PLA, No.15 Chang Yun Gong, Haidian District, Beijing, 100089, China.
Wei SunDepartment of Ophthalmology, Air Force Medical Center, PLA, No.15 Chang Yun Gong, Haidian District, Beijing, 100089, China.
Wei FuDepartment of Ophthalmology, Air Force Medical Center, PLA, No.15 Chang Yun Gong, Haidian District, Beijing, 100089, China.
Tianju MaDepartment of Ophthalmology, The Chinese People's Liberation Army General Hospital, No. 28 Fuxing Road, Haidian District, Beijing, 100853, China.
Zhaohui LiDepartment of Ophthalmology, The Chinese People's Liberation Army General Hospital, No. 28 Fuxing Road, Haidian District, Beijing, 100853, China. zhaohuili650@hotmail.com.
Hainan Branch of People's Liberation Army General Hospital · CNAir Force General Hospital PLA · CNChinese People's Liberation Army · CN

Funding

Beijing Natural Science Foundation 7182152the National Natural Science Foundation of China 81870640
6 · The paper itself

Abstract

backgroundThis study aimed to identify and evaluate potential molecular targets associated with the development of proliferative diabetic retinopathy (DR).

methodsThe microarray dataset "GSE60436" generated from fibrovascular membranes (FVMs) associated with proliferative DR was downloaded from the Gene Expression Omnibus database. Differentially expressed genes (DEGs) from the active FVMs and control or inactive FVMs and control were evaluated and co-DEGs were identified using VEEN analysis. Functional enrichment analysis, and protein-protein interactions (PPI) network and module analyses were performed on the upregulated and downregulated coDEGs. Finally, several predictions regarding microRNAs (miRNAs) and transcription factors (TFs) were made to construct a putative TF-miRNA-target network.

resultsA total of 1475 co-DEGs were screened in active/inactive FVM samples, including 461 upregulated and 1014 downregulated genes, which were enriched for angiogenesis [Hypoxia Inducible Factor 1 Subunit Alpha (HIF1A) and Placental Growth Factor (PGF)] and visual perception, respectively. In the case of the upregulated co-DEGs, Kinesin Family Member 11 (KIF11), and BUB1 Mitotic Checkpoint Serine/Threonine Kinase (BUB1) exhibited the highest values in both the PPI network and module analyses, as well as the genes related to mitosis. In the case of downregulated co-DEGs, several G protein subunits, including G Protein Subunit Beta 3 (GNB3), exhibited the highest values in both the PPI network and module analyses. The genes identified in the module analysis were found to be from the signal transduction-related pathways. In addition, we were able to identify four miRNAs and five TFs, including miR-136 and miR-374.

conclusionsIn brief, HIF1A, PGF, KIF11, G protein subunits, and miR-136, miR-374 may all be involved in angiogenesis, retinal endothelial cell proliferation, and visual signal transduction in proliferative DR. This study provides a number of novel insights that may aid the development of future studies dedicated to discovering novel therapeutic targets in proliferative DR.

Indexed as

Gene Expression ProfilingCell ProliferationDatasets as TopicDiabetic RetinopathyEndothelial CellsGene Regulatory NetworksGTP-Binding ProteinsHumansHypoxia-Inducible Factor 1, alpha SubunitKinesinsMicroarray AnalysisMicroRNAsMolecular Targeted TherapyPlacenta Growth FactorProtein Interaction Domains and MotifsRetinal NeovascularizationGTP-Binding ProteinsHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitKIF11 protein, humanKinesinsMicroRNAsMIRN136 microRNA, humanMIRN374 microRNA 374, humanPGF protein, humanPlacenta Growth FactorTranscription FactorsAngiogenesisDifferentially expressed geneFunctional enrichment analysismicroRNAProliferative diabetic retinopathy

Identifiers

PMID32290826
PMCPMC7155274
OpenAlexW3016060772

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.