Evidence map›Paper›PMID 32300138›Full record

ArticleScientific reports2020

Genome wide association study of 40 clinical measurements in eight dog breeds.

Yukihide Momozawa, Anne-Christine Merveille, Géraldine Battaille, Maria Wiberg, Jørgen Koch, Jakob Lundgren Willesen, Helle Friis Proschowsky, Vassiliki Gouni, Valérie Chetboul, Laurent Tiret and 5 more

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Genomic Medicine in Canine Periodontal Disease: A Systematic Review.Animals : an open access journal from MDPI · 2023
    Review
  4. The Shepherd and the Hunter: A Genomic Comparison of Italian Dog Breeds.Animals : an open access journal from MDPI · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Yukihide Momozawa *Unit of Animal Genomics, GIGA Institute, University of Liège, Liège, Belgium. momozawa@riken.jp.
Anne-Christine Merveille *Unit of Animal Genomics, GIGA Institute, University of Liège, Liège, Belgium.
Géraldine BattailleUnit of Animal Genomics, GIGA Institute, University of Liège, Liège, Belgium.
Maria WibergDepartment of Equine and Small Animal Medicine, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland.
Jørgen KochFaculty of Health and Medical Sciences, University of Copenhagen, 1870, Frederiksberg C, Denmark.
Jakob Lundgren WillesenFaculty of Health and Medical Sciences, University of Copenhagen, 1870, Frederiksberg C, Denmark.
Helle Friis ProschowskyThe Danish Kennel Club, 2680, Solrød Strand, Denmark.
Vassiliki GouniU955 - IMRB Inserm and Unité de Cardiologie d'Alfort (UCA), Université Paris-Est, École Nationale Vétérinaire d'Alfort, UPEC, 7 avenue du général de Gaulle, Maisons-Alfort, F-94700, France.
Valérie ChetboulU955 - IMRB Inserm and Unité de Cardiologie d'Alfort (UCA), Université Paris-Est, École Nationale Vétérinaire d'Alfort, UPEC, 7 avenue du général de Gaulle, Maisons-Alfort, F-94700, France.
Laurent TiretU955 - IMRB, Biology of the neuromuscular system, Inserm, National Veterinary School of Alfort (ENVA), Maisons-Alfort, France.
Merete FredholmFaculty of Health and Medical Sciences, University of Copenhagen, 1870, Frederiksberg C, Denmark.
Eija H SeppäläDepartment of Veterinary Biosciences, Department of Medical and Clinical Genetics, University of Helsinki, Folkhälsan Research Center, Helsinki, Finland.
Hannes LohiDepartment of Veterinary Biosciences, Department of Medical and Clinical Genetics, University of Helsinki, Folkhälsan Research Center, Helsinki, Finland.
Michel GeorgesUnit of Animal Genomics, GIGA Institute, University of Liège, Liège, Belgium.
Anne-Sophie LequarréUnit of Animal Genomics, GIGA Institute, University of Liège, Liège, Belgium. as.lequarre@uliege.be.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The domestic dog represents an ideal model for identifying susceptibility genes, many of which are shared with humans. In this study, we investigated the genetic contribution to individual differences in 40 clinically important measurements by a genome-wide association study (GWAS) in a multinational cohort of 472 healthy dogs from eight breeds. Meta-analysis using the binary effects model after breed-specific GWAS, identified 13 genome-wide significant associations, three of them showed experimental-wide significant associations. We detected a signal at chromosome 13 for the serum concentration of alanine aminotransferase (ALT) in which we detected four breed-specific signals. A large proportion of the variance of ALT (18.1-47.7%) was explained by this locus. Similarly, a single SNP was also responsible for a large proportion of the variance (6.8-78.4%) for other measurements such as fructosamine, stress during physical exam, glucose, and morphometric measurements. The genetic contribution of single variant was much larger than in humans. These findings illustrate the importance of performing meta-analysis after breed-specific GWAS to reveal the genetic contribution to individual differences in clinically important measurements, which would lead to improvement of veterinary medicine.

Indexed as

Genome-Wide Association StudyAlanine TransaminaseAnimalsBreedingChromosomesDog DiseasesDogsFructosamineGenetic Predisposition to DiseaseHumansMalePhenotypePolymorphism, Single NucleotideAlanine TransaminaseFructosamine

Identifiers

PMID32300138
PMCPMC7162946

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.