Evidence map›Paper›PMID 32338640›Full record

ArticleThe Journal of clinical investigation2020

Loss of the Fanconi anemia-associated protein NIPA causes bone marrow failure.

Stefanie Kreutmair, Miriam Erlacher, Geoffroy Andrieux, Rouzanna Istvanffy, Alina Mueller-Rudorf, Melissa Zwick, Tamina Rückert, Milena Pantic, Teresa Poggio, Khalid Shoumariyeh and 24 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. DNA damage and repair in the hematopoietic system.Acta biochimica et biophysica Sinica · 2022
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 11 institutions in 5 countries.

Stefanie KreutmairDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Miriam ErlacherGerman Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Geoffroy AndrieuxGerman Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Rouzanna IstvanffyDepartment of Internal Medicine III, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany.
Alina Mueller-RudorfDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Melissa ZwickDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Tamina RückertDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Milena PanticDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Teresa PoggioDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Khalid ShoumariyehDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Tony A MuellerDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Hiroyuki KawaguchiDepartment of Pediatrics, National Defense Medical College, Saitama, Japan.
Marie FolloDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Cathrin KlingebergDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Marcin WlodarskiGerman Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Irith BaumannInstitute of Pathology, Health Center Böblingen, Böblingen, Germany.
Dietmar PfeiferDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Michal KulinskiTranslational Research Institute, Academic Health System, Hamad Medical Corporation, Doha, Qatar.
Martina RudeliusInstitute of Pathology, Ludwig Maximilian University Munich, Munich, Germany.
Simone LemeerChair of Proteomics and Bioanalytics, Technical University of Munich, Freising, Germany.
Bernhard KusterChair of Proteomics and Bioanalytics, Technical University of Munich, Freising, Germany.
Christine DierksDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Christian PeschelGerman Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Nina Cabezas-WallscheidMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Jesus Duque-AfonsoDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Robert ZeiserDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Michael L ClearyDepartment of Pathology, Stanford University School of Medicine, Stanford, California, USA.
Detlev SchindlerDepartment of Human Genetics, Institute of Human Genetics, Biozentrum, University of Würzburg, Würzburg, Germany.
Annette Schmitt-GraeffDepartment of Pathology, Medical Center - University of Freiburg, Freiburg, Germany.
Melanie BoerriesGerman Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Charlotte M NiemeyerGerman Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Robert Aj OostendorpDepartment of Internal Medicine III, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany.
Justus DuysterDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Anna Lena IllertDepartment of Internal Medicine I, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
University of Freiburg · DEGerman Cancer Research Center · DETechnical University of Munich · DETUM Klinikum · DEHamad Medical Corporation · QAIBM (Germany) · DEInstitute of Human Genetics · PLLudwig-Maximilians-Universität München · DEMax Planck Institute of Immunobiology and Epigenetics · DENational Defense Medical College · JPStanford University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inherited bone marrow failure syndromes (IBMFSs) are a heterogeneous group of disorders characterized by defective hematopoiesis, impaired stem cell function, and cancer susceptibility. Diagnosis of IBMFS presents a major challenge due to the large variety of associated phenotypes, and novel, clinically relevant biomarkers are urgently needed. Our study identified nuclear interaction partner of ALK (NIPA) as an IBMFS gene, as it is significantly downregulated in a distinct subset of myelodysplastic syndrome-type (MDS-type) refractory cytopenia in children. Mechanistically, we showed that NIPA is major player in the Fanconi anemia (FA) pathway, which binds FANCD2 and regulates its nuclear abundance, making it essential for a functional DNA repair/FA/BRCA pathway. In a knockout mouse model, Nipa deficiency led to major cell-intrinsic defects, including a premature aging phenotype, with accumulation of DNA damage in hematopoietic stem cells (HSCs). Induction of replication stress triggered a reduction in and functional decline of murine HSCs, resulting in complete bone marrow failure and death of the knockout mice with 100% penetrance. Taken together, the results of our study add NIPA to the short list of FA-associated proteins, thereby highlighting its potential as a diagnostic marker and/or possible target in diseases characterized by hematopoietic failure.

Indexed as

Congenital Bone Marrow Failure SyndromesFanconi Anemia Complementation Group D2 ProteinNuclear ProteinsAnimalsHematopoietic Stem CellsMiceMice, KnockoutProtein BindingFancd2 protein, mouseFanconi Anemia Complementation Group D2 ProteinNIPA protein, mouseNuclear ProteinsBone marrowDNA repairHematologyHematopoietic stem cellsStem cells

Identifiers

PMID32338640
PMCPMC7260023
OpenAlexW3018347032

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.