Evidence map›Paper›PMID 32376783›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2020

Hippocampal Subregion Transcriptomic Profiles Reflect Strategy Selection during Cognitive Aging.

Garrett Smith, Asha Rani, Ashok Kumar, Jolie Barter, Thomas C Foster

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Sex, senescence, senolytics, and cognition.Frontiers in aging neuroscience · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The transcriptome of rat hippocampal subfields.IBRO neuroscience reports · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Garrett SmithDepartment of Neuroscience, McKnight Brain Institute, University of Florida, Gainesville, Florida 32610.
Asha RaniDepartment of Neuroscience, McKnight Brain Institute, University of Florida, Gainesville, Florida 32610.
Ashok KumarDepartment of Neuroscience, McKnight Brain Institute, University of Florida, Gainesville, Florida 32610.
Jolie BarterDepartment of Neuroscience, McKnight Brain Institute, University of Florida, Gainesville, Florida 32610.
Thomas C FosterDepartment of Neuroscience, McKnight Brain Institute, University of Florida, Gainesville, Florida 32610 Foster1@ufl.edu.
University of Florida · USID Genomics (United States) · US

Funding

University of Florida Older Americans Independence Center (OAIC)P30AG028740 · NIA · UNIVERSITY OF FLORIDA · PI Stephen D Anton · 2007 to 2026
$22.8M
Estrogen and cognition over the lifespanR01AG037984 · NIA · UNIVERSITY OF FLORIDA · PI FOSTER, THOMAS C, KUMAR, ASHOK · 2011 to 2022
$3.3M
Signaling cascades and memory deficits during agingR37AG036800 · NIA · UNIVERSITY OF FLORIDA · PI FOSTER, THOMAS C · 2010 to 2018
$2.6M
Use of viral-vectors for studying effects of chronic inflammation on executive functionR01AG052258 · NIA · UNIVERSITY OF FLORIDA · PI FOSTER, THOMAS C · 2016 to 2020
$1.9M
Systemic inflammation in regulating the onset and progression of brain agingR01AG049711 · NIA · UNIVERSITY OF FLORIDA · PI FOSTER, THOMAS C · 2015 to 2019
$1.5M
Estrogen and cognition over the lifespanR56AG037984 · NIA · UNIVERSITY OF FLORIDA · PI FOSTER, THOMAS C · 2010 to 2010
$271k
NIA NIH HHS P30 AG028740NIA NIH HHS R01 AG037984NIA NIH HHS R01 AG049711NIA NIH HHS R01 AG052258NIA NIH HHS R37 AG036800NIA NIH HHS R56 AG037984
6 · The paper itself

Abstract

Age-related cognitive impairments are associated with differentially expressed genes (DEGs) linked to defined neural systems; however, studies examining multiple regions of the hippocampus fail to find links between behavior and transcription in the dentate gyrus (DG). We hypothesized that use of a task requiring intact DG function would emphasize molecular signals in the DG associated with a decline in performance. We used a water maze beacon discrimination task to characterize young and middle-age male F344 rats, followed by a spatial reference memory probe trial test. Middle-age rats showed increased variability in discriminating two identical beacons. Use of an allocentric strategy and formation of a spatial reference memory were not different between age groups; however, older animals compensated for impaired beacon discrimination through greater reliance on spatial reference memory. mRNA sequencing of hippocampal subregions indicated DEGs in the DG of middle-age rats, linked to synaptic function and neurogenesis, correlated with beacon discrimination performance, suggesting that senescence of the DG underlies the impairment. Few genes correlated with spatial memory across age groups, with a greater number in region CA1. Age-related CA1 DEGs, correlated with spatial memory, were linked to regulation of neural activity. These results indicate that the beacon task is sensitive to impairment in middle age, and distinct gene profiles are observed in neural circuits that underlie beacon discrimination performance and allocentric memory. The use of different strategies in older animals and associated transcriptional profiles could provide an animal model for examining cognitive reserve and neural compensation of aging.

Indexed as

TranscriptomeAnimalsCognitive AgingDentate GyrusHippocampusMaze LearningRatsRats, Inbred F344Spatial Memoryaginghippocampuspattern separationreference memoryspatial discriminationtranscription

Identifiers

PMID32376783
PMCPMC7326352
OpenAlexW3021320887

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.