Evidence map›Paper›PMID 32394094›Full record

ReviewCurrent genetics2020

How yeast cells deal with stalled replication forks.

Matan Arbel, Batia Liefshitz, Martin Kupiec

Abstract readReview
PubMed Publisher
In one paragraph

Review in Current genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Practical Approaches for the YeastInternational journal of molecular sciences · 2023
    Review
  6. Article
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Matan ArbelSchool of Molecular Cell Biology and Biotechnology, Tel Aviv University, 69978, Ramat, Aviv, Israel.
Batia LiefshitzSchool of Molecular Cell Biology and Biotechnology, Tel Aviv University, 69978, Ramat, Aviv, Israel.
Martin KupiecSchool of Molecular Cell Biology and Biotechnology, Tel Aviv University, 69978, Ramat, Aviv, Israel. martin@tauex.tau.ac.il.ORCID http://orcid.org/0000-0002-7934-3342
Tel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA polymerases sometimes stall during DNA replication at sites where DNA is damaged, or upon encounter with proteins or secondary structures of DNA. When that happens, the polymerase clamp PCNA can become modified with a single ubiquitin moiety at lysine 164, opening DNA Damage Tolerance (DDT) mechanisms that either repair or bypass the lesions. An alternative repair mechanism is the salvage recombination (SR) pathway, which copies information from the sister chromatid. SUMOylation of PCNA at the same lysine, or at lysine 127, can recruit the Srs2 helicase, which negatively controls SR. Recently, we have dissected the relationship between SR and the DDT pathways, and showed that overexpression of either the PCNA unloader Elg1, or the Rad52 homologous recombination protein, can bypass the repression by Srs2. Our results shed light on the interactions between different DNA damage repair/bypass proteins, and underscore the importance of PCNA modifications in organizing the complex task of dealing with DNA damage during replication of the genetic material.

Indexed as

DNA ReplicationCarrier ProteinsDNA DamageDNA, FungalDNA HelicasesDNA RepairHomologous RecombinationProliferating Cell Nuclear AntigenSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSumoylationCarrier ProteinsDNA, FungalDNA HelicasesElg1 protein, S cerevisiaePOL30 protein, S cerevisiaeProliferating Cell Nuclear AntigenSaccharomyces cerevisiae ProteinsSRS2 protein, S cerevisiaeDNA repairElg1Genome stabilityHomologous recombinationPCNASaccharomyces cerevisae

Identifiers

PMID32394094
OpenAlexW3024748391

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.