Evidence map›Paper›PMID 32467224›Full record

ArticleGenes & development2020

HDAC3 ensures stepwise epidermal stratification via NCoR/SMRT-reliant mechanisms independent of its histone deacetylase activity.

Katherine M Szigety, Fang Liu, Chase Y Yuan, Deborah J Moran, Jeremy Horrell, Heather R Gochnauer, Ronald N Cohen, Jonathan P Katz, Klaus H Kaestner, John T Seykora and 4 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 32 citations in OpenAlex.

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  12. The Role of Histone Deacetylases in Acute Lung Injury-Friend or Foe.International journal of molecular sciences · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Katherine M SzigetyBiochemistry and Molecular Biophysics Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Fang LiuDepartment of Dermatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Chase Y YuanDepartment of Dermatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Deborah J MoranDepartment of Dermatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Jeremy HorrellDepartment of Dermatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Heather R GochnauerDepartment of Dermatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Ronald N CohenSection of Endocrinology, Diabetes, and Metabolism, University of Chicago, Chicago, Illinois 60637, USA.
Jonathan P KatzDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Klaus H KaestnerDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
John T SeykoraDepartment of Dermatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
John W TobiasPenn Genomic Analysis Core, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Mitchell A LazarInstitute for Diabetes, Obesity, and Metabolism, Division of Endocrinology, Diabetes, and Metabolism, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Mingang XuBlack Family Stem Cell Institute, Icahn School of Medicine at Mount Sinai, New York, New York 10029, USA.
Sarah E MillarDepartment of Dermatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
University of Pennsylvania · USIcahn School of Medicine at Mount Sinai · USUniversity of Chicago · US

Funding

Pilot and Feasibility ProgramP30DK020595 · NIDDK · UNIVERSITY OF CHICAGO · PI RONALD N COHEN · 2013 to 2026
$20.9M
TRAINING GRANT IN HEMOSTASIS AND THROMBOSIST32HL007971 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI Rodney M Camire · 2001 to 2026
$10.6M
Penn Dermatology Research Training ProgramT32AR007465 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI Elizabeth Anne Grice, David Joel Margolis · 1986 to 2026
$9.0M
Study Design and Data AnalysisP30AR069589 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI Elizabeth Anne Grice · 2016 to 2026
$8.6M
THYROID HORMONE RECEPTORS--REGULATION AND FUNCTIONR01DK043806 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI MITCHELL A. LAZAR · 1991 to 2026
$4.9M
Regulation of differentiation in esophageal epitheliaR01DK069984 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI KATZ, JONATHAN P · 2006 to 2015
$2.8M
KLF-mediated coordination of signaling and epigenetic mechanisms in the skinR01AR076428 · NIAMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MILLAR, SARAH E. · 2020 to 2024
$1.8M
HDAC functions in skin development, renewal and diseaseR01AR063146 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI MILLAR, SARAH E. · 2013 to 2017
$1.7M
KLF4 and WNT5A in esophageal epithelial differentiation and stratificationR01DK119314 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI KATZ, JONATHAN P · 2019 to 2022
$1.5M
Epigenetic Regulation of Keratinocyte-Mediated Innate ImmunityF31AR072461 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI SZIGETY, KATHERINE MARGARET · 2017 to 2018
$55k
NHLBI NIH HHS T32 HL007971NIAMS NIH HHS F31 AR072461NIAMS NIH HHS P30 AR069589NIAMS NIH HHS R01 AR063146NIAMS NIH HHS R01 AR076428NIAMS NIH HHS T32 AR007465NIDDK NIH HHS P30 DK020595NIDDK NIH HHS R01 DK043806NIDDK NIH HHS R01 DK069984NIDDK NIH HHS R01 DK119314
6 · The paper itself

Abstract

Chromatin modifiers play critical roles in epidermal development, but the functions of histone deacetylases in this context are poorly understood. The class I HDAC, HDAC3, is of particular interest because it plays divergent roles in different tissues by partnering with tissue-specific transcription factors. We found that HDAC3 is expressed broadly in embryonic epidermis and is required for its orderly stepwise stratification. HDAC3 protein stability in vivo relies on NCoR and SMRT, which function redundantly in epidermal development. However, point mutations in the NCoR and SMRT deacetylase-activating domains, which are required for HDAC3's enzymatic function, permit normal stratification, indicating that HDAC3's roles in this context are largely independent of its histone deacetylase activity. HDAC3-bound sites are significantly enriched for predicted binding motifs for critical epidermal transcription factors including AP1, GRHL, and KLF family members. Our results suggest that among these, HDAC3 operates in conjunction with KLF4 to repress inappropriate expression of

Indexed as

AnimalsCell DifferentiationEmbryo, MammalianEpidermal CellsEpidermisGene DeletionGene Expression Regulation, DevelopmentalGenes, LethalHistone Deacetylase 3Histone DeacetylasesKruppel-Like Factor 4Kruppel-Like Transcription FactorsMiceMice, Inbred C57BLMutationNuclear Receptor Co-Repressor 1Histone Deacetylase 3Histone DeacetylasesKlf4 protein, mouseKruppel-Like Factor 4Kruppel-Like Transcription FactorsNcor1 protein, mouseNcor2 protein, mouseNuclear Receptor Co-Repressor 1Nuclear Receptor Co-Repressor 2Rela protein, mouseTranscription Factor RelAchromatinepidermal barrierepidermisepigeneticHDAC3histone deacetylaseKLF4mouseNCoRSMRT

Identifiers

PMID32467224
PMCPMC7328513
OpenAlexW3031342450

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.