Evidence map›Paper›PMID 32471850›Full record

ArticleDisease models & mechanisms2020

Sentinel interaction mapping - a generic approach for the functional analysis of human disease gene variants using yeast.

Barry P Young, Kathryn L Post, Jesse T Chao, Fabian Meili, Kurt Haas, Christopher Loewen

Open access · goldAbstract readValidation Study
In one paragraph

Article in Disease models & mechanisms, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Sharing resources to advance translational research.Disease models & mechanisms · 2022
    Article
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Barry P YoungDepartment of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, Vancouver, BC V6T 1Z3, Canada.ORCID 0000-0002-8777-0352
Kathryn L PostDepartment of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, Vancouver, BC V6T 1Z3, Canada.ORCID 0000-0002-1777-5158
Jesse T ChaoDepartment of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, Vancouver, BC V6T 1Z3, Canada.ORCID 0000-0002-6995-9581
Fabian MeiliDepartment of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, Vancouver, BC V6T 1Z3, Canada.ORCID 0000-0002-1726-4198
Kurt HaasDepartment of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, Vancouver, BC V6T 1Z3, Canada.ORCID 0000-0003-4754-1560
Christopher LoewenDepartment of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, Vancouver, BC V6T 1Z3, Canada christopher.loewen@ubc.ca.ORCID 0000-0002-1760-5749
University of British Columbia · CA

Funding

CIHR PJT-152967
6 · The paper itself

Abstract

Advances in sequencing technology have led to an explosion in the number of known genetic variants of human genes. A major challenge is to now determine which of these variants contribute to diseases as a result of their effect on gene function. Here, we describe a generic approach using the yeast

Indexed as

Genetic VariationGenomicsComputational BiologyDatabases, GeneticGene Expression Regulation, FungalGenetic Predisposition to DiseaseHigh-Throughput Nucleotide SequencingHumansPhenotypePTEN PhosphohydrolaseReproducibility of ResultsSaccharomyces cerevisiaeUp-RegulationPTEN PhosphohydrolasePTEN protein, humanHuman disease genesVariantsYeast

Identifiers

PMID32471850
PMCPMC7358137
OpenAlexW3032699085

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.