Evidence map›Paper›PMID 32499821›Full record

ArticleFrontiers in genetics2020

Transcriptomic Analysis of circRNAs and mRNAs Reveals a Complex Regulatory Network That Participate in Follicular Development in Chickens.

Manman Shen, Tingting Li, Fuxiang Chen, Pengfeng Wu, Ying Wang, Lan Chen, Kaizhou Xie, Jinyu Wang, Genxi Zhang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 44 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Manman ShenCollege of Animal Science and Technology, Yangzhou University, Yangzhou, China.
Tingting LiCollege of Animal Science and Technology, Yangzhou University, Yangzhou, China.
Fuxiang ChenCollege of Animal Science and Technology, Yangzhou University, Yangzhou, China.
Pengfeng WuCollege of Animal Science and Technology, Yangzhou University, Yangzhou, China.
Ying WangCollege of Animal Science and Technology, Yangzhou University, Yangzhou, China.
Lan ChenCollege of Animal Science and Technology, Yangzhou University, Yangzhou, China.
Kaizhou XieCollege of Animal Science and Technology, Yangzhou University, Yangzhou, China.
Jinyu WangCollege of Animal Science and Technology, Yangzhou University, Yangzhou, China.
Genxi ZhangCollege of Animal Science and Technology, Yangzhou University, Yangzhou, China.
Yangzhou University · CNPoultry Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Follicular development plays a key role in poultry reproduction, affecting clutch traits and thus egg production. Follicular growth is determined by granulosa cells (GCs), theca cells (TCs), and oocyte at the transcription, translation, and secretion levels. With the development of bioinformatic and experimental techniques, non-coding RNAs have been shown to participate in many life events. In this study, we investigated the transcriptomes of GCs and TCs in three different physiological stages: small yellow follicle (SYF), smallest hierarchical follicle (F6), and largest hierarchical follicle (F1) stages. A differential expression (DE) analysis, weighted gene co-expression network analysis (WGCNA), and bioinformatic analyses were performed. A total of 18,016 novel circular RNAs (circRNAs) were detected in GCs and TCs, 8127 of which were abundantly expressed in both cell types. and more circRNAs were differentially expressed between GCs and TCs than mRNAs. Enrichment analysis showed that the DE transcripts were mainly involved in cell growth, proliferation, differentiation, and apoptosis. In the WGCNA analysis, we identified six specific modules that were related to the different cell types in different stages of development. A series of central hub genes, including

Indexed as

circRNAESR1folliclehub genestranscriptomeWGCNA

Identifiers

PMID32499821
PMCPMC7243251
OpenAlexW3025424760

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.