Evidence map›Paper›PMID 32501499›Full record

SynthesisThe Journal of clinical endocrinology and metabolism2020

An Intronic HCP5 Variant Is Associated With Age of Onset and Susceptibility to Graves Disease in UK and Polish Cohorts.

Laura Claire Lane, Aleksander Kuś, Tomasz Bednarczuk, Artur Bossowski, Jacek Daroszewski, Beata Jurecka-Lubieniecka, Heather Jane Cordell, Simon Henry Schofield Pearce, Timothy Cheetham, Anna Louise Mitchell

Open access · hybridAbstract readMeta-Analysis
In one paragraph

Synthesis in The Journal of clinical endocrinology and metabolism, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 2 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 2 syntheses or guidelines pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Guideline
  3. Review
  4. Review
  5. The genetics of Graves' disease.Reviews in endocrine & metabolic disorders · 2024
    Review
  6. Graves' disease: moving forwards.Archives of disease in childhood · 2023
    Review
  7. Article
  8. An update on thyroid disorders in the postpartum period.Journal of endocrinological investigation · 2022
    Review
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 2 countries.

Laura Claire LaneTranslational and Clinical Research Institute, Newcastle University, Newcastle-upon-Tyne, UK.
Aleksander KuśDepartment of Internal Medicine and Endocrinology, Medical University of Warsaw, Warsaw, Poland.
Tomasz BednarczukDepartment of Internal Medicine and Endocrinology, Medical University of Warsaw, Warsaw, Poland.
Artur BossowskiDepartment of Pediatrics, Endocrinology and Diabetes with a Cardiology Unit, Medical University of Bialystok, Bialystok, Poland.
Jacek DaroszewskiDepartment of Endocrinology, Diabetes and Isotope Therapy, Wroclaw Medical University, Wroclaw, Poland.
Beata Jurecka-LubienieckaDepartment of Nuclear Medicine and Endocrine Oncology, Maria Sklodowska-Curie Institute - Oncology Center, Gliwice Branch, Gliwice, Poland.
Heather Jane CordellPopulation Health Sciences Institute, Newcastle University, Newcastle-upon-Tyne, UK.
Simon Henry Schofield PearceTranslational and Clinical Research Institute, Newcastle University, Newcastle-upon-Tyne, UK.
Timothy CheethamTranslational and Clinical Research Institute, Newcastle University, Newcastle-upon-Tyne, UK.
Anna Louise MitchellTranslational and Clinical Research Institute, Newcastle University, Newcastle-upon-Tyne, UK.
Royal Victoria Infirmary · GBMedical University of Warsaw · PLGreat North Children's Hospital · GBMedical University of Białystok · PLNewcastle University · GBThe Maria Sklodowska-Curie National Research Institute of Oncology · PLWroclaw Medical University · PL

Funding

Medical Research Council G0500783Medical Research Council MR/S001611/1
6 · The paper itself

Abstract

contextThe genetic background of young-onset Graves disease (GD) remains largely unknown. An intronic variant in human leukocyte antigen (HLA) complex P5 (HCP5) has previously been associated with GD susceptibility and age of onset in a cohort of Polish patients.

objectiveWe aimed to investigate the association of the HCP5 variant rs3094228 with GD susceptibility and age of onset in a UK cohort and conduct a meta-analysis of UK and Polish data. DESIGN AND

participantsrs3094228 was genotyped in 469 UK patients with GD using Taqman chemistry. Genotype frequencies were compared with genotypic data available from the Wellcome Trust case-control consortium using logistic regression analysis. To determine whether rs3094228 is independently associated with age of GD onset, the HLA DRB1*0301 tagging variant, rs535777, was also genotyped.

resultsThe C allele of rs3094228 was overrepresented in the UK GD cohort compared with controls (P allele=5.08 × 10-9, odds ratio 1.76; [95% confidence interval, 1.46-2.13]). This association was more marked in young-onset GD (<30 years) (P allele=1.70 × 10-10 vs P allele=0.0008). The meta-analysis of UK and Polish data supported the association of the C allele with GD susceptibility (P allele=1.79 × 10-5) and age of onset (P allele=5.63 × 10-8). Haplotype analysis demonstrated that rs3094228 is associated with age of GD onset (P = 2.39 × 10-6) independent of linkage disequilibrium with HLA DRB1*0301.

conclusionThe rs3094228 HCP5 polymorphism is independently associated with GD susceptibility and age of onset in a UK GD cohort. Our findings indicate a potential role of long noncoding ribonucleic acids, including HCP5, in GD pathogenesis, particularly in the younger population.

Indexed as

Polymorphism, Single NucleotideAdolescentAdultAgedAged, 80 and overAge of OnsetCase-Control StudiesChildChild, PreschoolCohort StudiesFemaleGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseGraves DiseaseHumansHCP5 long noncoding RNA, humanRNA, Long NoncodingautoimmunegenotypingGraves diseasemeta-analysispolymorphismthyroid

Identifiers

PMID32501499
PMCPMC7382372
OpenAlexW3034028599

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.