ArticlePeerJ2020
SMRT sequencing of the full-length transcriptome of the
Article in PeerJ, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
What it found
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The trial behind it
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Who cites it
16 citing papers in PubMed.
- Transcriptomic responses of red palm weevil (Coleoptera: Curculionidae) larvae to low-temperature exposure.Journal of insect science (Online) · 2026Article
- Comparative Transcriptome Analysis ofInsects · 2025Article
- Full-length transcriptome annotation of a pyrosome, Pyrosoma atlanticum (Chordata, Thaliacea).Scientific data · 2024Article
- Identification of testis development-related genes by combining Iso-Seq and RNA-Seq inFrontiers in cell and developmental biology · 2024Article
- Full-Length Transcriptome and Gene Expression Analysis of DifferentAnimals : an open access journal from MDPI · 2023Article
- SMRT Sequencing Technology Was Used to Construct theInsects · 2023Article
- Article
- Omics in the Red Palm WeevilInsects · 2023Review
- Article
- The transcriptomic response ofFrontiers in cellular and infection microbiology · 2023Article
- Article
- The combination of SMRT sequencing and Illumina sequencing highlights organ-specific and age-specific expression patterns of miRNAs in Sika Deer.Frontiers in veterinary science · 2022Article
- A full-length transcriptome and gene expression analysis of three detoxification gene families in a predatory stink bug,Frontiers in physiology · 2022Article
- SMRT Sequencing Reveals Candidate Genes and Pathways With Medicinal Value inFrontiers in genetics · 2022Article
- Haplotype-resolved genome assembly enables gene discovery in the red palm weevil Rhynchophorus ferrugineus.Scientific reports · 2021Article
- The Landscapes of Full-Length Transcripts and Splice Isoforms as Well as Transposons Exonization in the Lepidopteran Model System,Frontiers in genetics · 2021Article
Corrections and comments
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundRed palm weevil
methodsIn this study, we used PacBio Iso-Seq and Illumina RNA-seq to first generate transcriptome from three developmental stages of
resultsA total of 63,801 nonredundant full-length transcripts were generated with an average length of 2,964 bp from three developmental stages, including the 7th instar larva, pupa, female adult and male adult. These transcripts showed a high annotation rate in seven public databases, with 54,999 (86.20%) successfully annotated. Meanwhile, 2,184 alternative splicing (AS) events, 2,084 transcription factors (TFs), 66,230 simple sequence repeats (SSR) and 9,618 Long noncoding RNAs (lncRNAs) were identified. In summary, our results provide a new source of full-length transcriptional data and information for the further study of gene expression and genetics in
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.