Evidence map›Paper›PMID 32555650›Full record

ArticlePLoS genetics2020

The role of ROC75 as a daytime component of the circadian oscillator in Chlamydomonas reinhardtii.

Takuya Matsuo, Takahiro Iida, Ayumi Ohmura, Malavika Gururaj, Daisaku Kato, Risa Mutoh, Kunio Ihara, Masahiro Ishiura

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Sensing a rainbow of colors: algal photoreceptors.Frontiers in plant science · 2025
    Review
  2. Circadian regulation of metabolism across photosynthetic organisms.The Plant journal : for cell and molecular biology · 2023
    Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Takuya MatsuoCenter for Gene Research, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan.ORCID 0000-0002-8030-2361
Takahiro IidaCenter for Gene Research, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan.
Ayumi OhmuraCenter for Gene Research, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan.
Malavika GururajCenter for Gene Research, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan.
Daisaku KatoCenter for Gene Research, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan.
Risa MutohCenter for Gene Research, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan.ORCID 0000-0003-0069-8931
Kunio IharaCenter for Gene Research, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan.
Masahiro IshiuraCenter for Gene Research, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan.
Nagoya University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The circadian clocks in chlorophyte algae have been studied in two model organisms, Chlamydomonas reinhardtii and Ostreococcus tauri. These studies revealed that the chlorophyte clocks include some genes that are homologous to those of the angiosperm circadian clock. However, the genetic network architectures of the chlorophyte clocks are largely unknown, especially in C. reinhardtii. In this study, using C. reinhardtii as a model, we characterized RHYTHM OF CHLOROPLAST (ROC) 75, a clock gene encoding a putative GARP DNA-binding transcription factor similar to the clock proteins LUX ARRHYTHMO (LUX, also called PHYTOCLOCK 1 [PCL1]) and BROTHER OF LUX ARRHYTHMO (BOA, also called NOX) of the angiosperm Arabidopsis thaliana. We observed that ROC75 is a day/subjective day-phase-expressed nuclear-localized protein that associates with some night-phased clock genes and represses their expression. This repression may be essential for the gating of reaccumulation of the other clock-related GARP protein, ROC15, after its light-dependent degradation. The restoration of ROC75 function in an arrhythmic roc75 mutant under constant darkness leads to the resumption of circadian oscillation from the subjective dawn, suggesting that the ROC75 restoration acts as a morning cue for the C. reinhardtii clock. Our study reveals a part of the genetic network of C. reinhardtii clock that could be considerably different from that of A. thaliana.

Indexed as

Gene Expression Regulation, PlantChlamydomonas reinhardtiiChloroplastsCircadian ClocksCircadian RhythmGene Regulatory NetworksMutationPhotoperiodPlant ProteinsPlants, Genetically ModifiedTranscription FactorsPlant ProteinsTranscription Factors

Identifiers

PMID32555650
PMCPMC7299327
OpenAlexW3036942636

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.