Evidence map›Paper›PMID 32560902›Full record

ArticleVirology2020

Activation of DNA damage repair factors in HPV positive oropharyngeal cancers.

Takeyuki Kono, Paul Hoover, Kate Poropatich, Tatjana Paunesku, Bharat B Mittal, Sandeep Samant, Laimonis A Laimins

Open access · greenAbstract read
In one paragraph

Article in Virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. p53-dependent R-loop formation and HPV pathogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. HPV Meets APOBEC: New Players in Head and Neck Cancer.International journal of molecular sciences · 2021
    Review
  14. FOXM1 drives HPV+ HNSCC sensitivity to WEE1 inhibition.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Takeyuki KonoDepartment of Microbiology-Immunology, Northwestern University, Feinberg School of Medicine, Chicago, IL, 60611, USA.
Paul HooverDepartment of Microbiology-Immunology, Northwestern University, Feinberg School of Medicine, Chicago, IL, 60611, USA.
Kate PoropatichDepartment of Pathology, Northwestern University, Feinberg School of Medicine, Chicago, IL, 60611, USA.
Tatjana PauneskuDepartment of Radiation Oncology, Northwestern University, Feinberg School of Medicine, Chicago, IL, 60611, USA.
Bharat B MittalDepartment of Radiation Oncology, Northwestern University, Feinberg School of Medicine, Chicago, IL, 60611, USA.
Sandeep SamantDepartment of Otolaryngology Head and Neck Surgery, Northwestern University, Feinberg School of Medicine, Chicago, IL, USA.
Laimonis A LaiminsDepartment of Microbiology-Immunology, Northwestern University, Feinberg School of Medicine, Chicago, IL, 60611, USA. Electronic address: l-laimins@northwestern.edu.
Northwestern University · US

Funding

REGULATION OF HUMAN PAPILLOMAVIRUS GENE EXPRESSIONR01CA059655 · NCI · UNIVERSITY OF CHICAGO · PI LAIMINS, LAIMONIS A. · 1993 to 2023
$7.4M
Renewal: HPV and the DNA Damage ResponseR01CA142861 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Laimonis A. LAIMINS · 2010 to 2026
$5.2M
NCI NIH HHS R01 CA059655NCI NIH HHS R01 CA142861
6 · The paper itself

Abstract

The mechanisms regulating viral pathogenesis of human papillomavirus (HPV) associated oropharyngeal squamous cell cancers (OPSCC) are not well understood. In the cervix, activation of DNA damage repair pathways is critical for viral replication but little is known about their role in OPSCC. APOBEC factors have been shown to be increased in OPSCC but the significance of this is unclear. We therefore examined activation of DNA damage and APOBEC factors in HPV-induced OPSCC. Our studies show significantly increased levels of pCHK1, FANCD2, BRCA1, RAD51, pSMC1 and γH2AX foci in HPV-positive samples as compared to HPV-negative while the ATM effector kinase, pCHK2, was not increased. Similar differences were observed when the levels of proteins were examined in OPSCC cell lines. In contrast, the levels of APOBEC3B and 3A were found to be similar in both HPV-positive and -negative OPSCC. Our studies suggest members of ATR pathway and FANCD2 may be important in HPV-induced OPSCC.

Indexed as

Acid Anhydride HydrolasesATPases Associated with Diverse Cellular ActivitiesCheckpoint Kinase 1Cytidine DeaminaseDNA-Binding ProteinsDNA RepairFanconi Anemia Complementation Group D2 ProteinHumansMinor Histocompatibility AntigensNeoplasms, Squamous CellOropharyngeal NeoplasmsPapillomaviridaePapillomavirus InfectionsAcid Anhydride HydrolasesAPOBEC3B protein, humanATPases Associated with Diverse Cellular ActivitiesCheckpoint Kinase 1Cytidine DeaminaseDNA-Binding ProteinsFanconi Anemia Complementation Group D2 ProteinMinor Histocompatibility AntigensPSMC1 protein, humanRAD50 protein, humanAPOBEC3AAPOBEC3BATRDNA damageFANCD2Head and neck cancerHPV

Identifiers

PMID32560902
PMCPMC7333731
OpenAlexW3028350593

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.