Evidence map›Paper›PMID 32561713›Full record

ArticleNature communications2020

Diauxie and co-utilization of carbon sources can coexist during bacterial growth in nutritionally complex environments.

Elena Perrin, Veronica Ghini, Michele Giovannini, Francesca Di Patti, Barbara Cardazzo, Lisa Carraro, Camilla Fagorzi, Paola Turano, Renato Fani, Marco Fondi

Abstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Elena Perrin *Department of Biology, University of Florence, Florence, Italy.ORCID http://orcid.org/0000-0001-5148-3178
Veronica Ghini *Consorzio Interuniversitario Risonanze Magnetiche di Metallo Proteine (CIRMMP), Florence, Italy.
Michele GiovanniniDepartment of Biology, University of Florence, Florence, Italy.
Francesca Di PattiDepartment of Physics and Astronomy, University of Florence, Florence, Italy.
Barbara CardazzoDepartment of Comparative Biomedicine and Food Science, University of Padova, Padova, Italy.
Lisa CarraroDepartment of Comparative Biomedicine and Food Science, University of Padova, Padova, Italy.
Camilla FagorziDepartment of Biology, University of Florence, Florence, Italy.ORCID http://orcid.org/0000-0002-9996-8868
Paola TuranoCenter of Magnetic Resonance (CERM), University of Florence, Florence, Italy.
Renato FaniDepartment of Biology, University of Florence, Florence, Italy.
Marco FondiDepartment of Biology, University of Florence, Florence, Italy. marco.fondi@unifi.it.ORCID http://orcid.org/0000-0001-9291-5467

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is commonly thought that when multiple carbon sources are available, bacteria metabolize them either sequentially (diauxic growth) or simultaneously (co-utilization). However, this view is mainly based on analyses in relatively simple laboratory settings. Here we show that a heterotrophic marine bacterium, Pseudoalteromonas haloplanktis, can use both strategies simultaneously when multiple possible nutrients are provided in the same growth experiment. The order of nutrient uptake is partially determined by the biomass yield that can be achieved when the same compounds are provided as single carbon sources. Using transcriptomics and time-resolved intracellular

Indexed as

Models, BiologicalBiomassCarbonCarbon-13 Magnetic Resonance SpectroscopyCulture MediaHeterotrophic ProcessesKineticsProton Magnetic Resonance SpectroscopyPseudoalteromonasCarbonCulture Media

Identifiers

PMID32561713
PMCPMC7305145

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.