Evidence map›Paper›PMID 32568261›Full record

ArticleJournal of animal science and technology2020

Signatures of positive selection underlying beef production traits in Korean cattle breeds.

Zewdu Edea, Kyoung Sub Jung, Sung-Sub Shin, Song-Won Yoo, Jae Won Choi, Kwan-Suk Kim

Open access · goldAbstract read
In one paragraph

Article in Journal of animal science and technology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 46 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zewdu EdeaDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Korea.ORCID https://orcid.org/0000-0003-2343-4832
Kyoung Sub JungInstitute of Livestock and Veterinary Research, Cheongju 28153, Korea.ORCID https://orcid.org/0000-0002-9145-9794
Sung-Sub ShinKorea Institute for Animal Products Quality Evaluation, Sejong 30100, Korea.ORCID https://orcid.org/0000-0001-5684-6636
Song-Won YooKorea Institute for Animal Products Quality Evaluation, Sejong 30100, Korea.ORCID https://orcid.org/0000-0002-7650-0779
Jae Won ChoiInstitute of Livestock and Veterinary Research, Cheongju 28153, Korea.ORCID https://orcid.org/0000-0002-9632-8179
Kwan-Suk KimDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Korea.ORCID https://orcid.org/0000-0002-5895-4398
Chungbuk National University · KRKorea Institute for Animal Products Quality Evaluation · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The difference in the breeding programs and population history may have diversely shaped the genomes of Korean native cattle breeds. In the absence of phenotypic data, comparisons of breeds that have been subjected to different selective pressures can aid to identify genomic regions and genes controlling qualitative and complex traits. In this study to decipher genetic variation and identify evidence of divergent selection, 3 Korean cattle breeds were genotyped using the recently developed high-density GeneSeek Genomic Profiler F250 (GGP-F250) array. The three Korean cattle breeds clustered according to their coat color phenotypes and breeding programs. The Heugu breed reliably showed smaller effective population size at all generations considered. Across the autosomal chromosomes, 113 and 83 annotated genes were identified from Hanwoo-Chikso and Hanwoo-Heugu comparisons, respectively of which 16 genes were shared between the two pairwise comparisons. The most important signals of selection were detected on bovine chromosomes 14 (24.39-25.13 Mb) and 18 (13.34-15.07 Mb), containing genes related to body size, and coat color (

Indexed as

Candidate genesGGP-F250Korean cattleSelection signatures

Identifiers

PMID32568261
PMCPMC7288235
OpenAlexW3035270244

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.