Evidence map›Paper›PMID 32629790›Full record

ArticleHigh-throughput2020

Dark Proteome Database: Studies on Disorder.

Nelson Perdigão, Pedro M C Pina, Cátia Rocha, João Manuel R S Tavares, Agostinho Rosa

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in High-throughput, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. "Protein" no longer means what it used to.Current research in structural biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nelson PerdigãoInstituto de Sistemas e Robótica, Instituto Superior Técnico, Universidade de Lisboa, 1049-001 Lisboa, Portugal.ORCID 0000-0001-8600-1650
Pedro M C PinaInstituto de Sistemas e Robótica, Instituto Superior Técnico, Universidade de Lisboa, 1049-001 Lisboa, Portugal.
Cátia RochaInstituto de Sistemas e Robótica, Instituto Superior Técnico, Universidade de Lisboa, 1049-001 Lisboa, Portugal.
João Manuel R S TavaresInstituto de Ciência e Inovação em Engenharia Mecânica e Engenharia Industrial, Departamento de Engenharia Mecânica, Faculdade de Engenharia, Universidade do Porto, 4200-465 Porto, Portugal.ORCID 0000-0001-7603-6526
Agostinho RosaInstituto de Sistemas e Robótica, Instituto Superior Técnico, Universidade de Lisboa, 1049-001 Lisboa, Portugal.ORCID 0000-0001-5165-3114

Funding

Fundação para a Ciência e a Tecnologia UID/EEA/5009/2019
6 · The paper itself

Abstract

There is a misconception that intrinsic disorder in proteins is equivalent to darkness. The present study aims to establish, in the scope of the Swiss-Prot and Dark Proteome databases, the relationship between disorder and darkness. Three distinct predictors were used to calculate the disorder of Swiss-Prot proteins. The analysis of the results obtained with the used predictors and visualization paradigms resulted in the same conclusion that was reached before: disorder is mostly unrelated to darkness.

Indexed as

intrinsic disorderpredictionproteins

Identifiers

PMID32629790
PMCPMC7563470

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.