Evidence map›Paper›PMID 32650368›Full record

ArticleGenes2020

Quantitative Proteomics of Urinary Bladder Cancer Cell Lines Identify UAP1 as a Potential Therapeutic Target.

Vinuth N Puttamallesh, Barnali Deb, Kirti Gondkar, Ankit Jain, Bipin Nair, Akhilesh Pandey, Aditi Chatterjee, Harsha Gowda, Prashant Kumar

Open access · goldAbstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Vinuth N PuttamalleshInstitute of Bioinformatics, International Technology Park, Bangalore 560066, India.
Barnali DebInstitute of Bioinformatics, International Technology Park, Bangalore 560066, India.
Kirti GondkarInstitute of Bioinformatics, International Technology Park, Bangalore 560066, India.
Ankit JainInstitute of Bioinformatics, International Technology Park, Bangalore 560066, India.ORCID 0000-0002-5733-9705
Bipin NairAmrita School of Biotechnology, Amrita Vishwa Vidyapeetham, Kollam 690525, India.
Akhilesh PandeyInstitute of Bioinformatics, International Technology Park, Bangalore 560066, India.
Aditi ChatterjeeInstitute of Bioinformatics, International Technology Park, Bangalore 560066, India.ORCID 0000-0001-8474-5824
Harsha GowdaInstitute of Bioinformatics, International Technology Park, Bangalore 560066, India.
Prashant KumarInstitute of Bioinformatics, International Technology Park, Bangalore 560066, India.ORCID 0000-0001-8975-5108
Manipal Academy of Higher Education · INInstitute of Bioinformatics · INAmrita Vishwa Vidyapeetham · INMayo Clinic · US

Funding

Wellcome Trust
6 · The paper itself

Abstract

Bladder carcinoma (BC) incidence and mortality rates are increasing worldwide. The development of novel therapeutic strategies is required to improve clinical management of this cancer. Aberrant protein expression may lead to cancer initiation and progression. Therefore, the identification of these potential protein targets and limiting their expression levels would provide alternative treatment options. In this study, we utilized a liquid-chromatography tandem mass spectrometry-based global proteomics approach to identify differentially expressed proteins in bladder cancer cell lines. A total of 3913 proteins were identified in this study, of which 479 proteins were overexpressed and 141 proteins were downregulated in 4 out of 6 BC cell lines when compared with normal human urothelial cell line (TERT-NHUC). We evaluated the role of UDP-N-acetylhexosamine pyrophosphorylase (UAP1) in bladder cancer pathogenesis. The silencing of UAP1 led to reduction in proliferation, invasion, colony formation and migration capability of bladder cancer cell lines. Thus, our study reveals UAP1 as a promising therapeutic target for bladder cancer.

Indexed as

Cell Line, TumorCell MovementCell ProliferationGene Expression Regulation, NeoplasticHumansNucleotidyltransferasesProteomeUrinary Bladder NeoplasmsNucleotidyltransferasesProteomeUDPacetylglucosamine pyrophosphorylasemolecular subtypesquantitative proteomicstherapeutic targeturothelial carcinoma

Identifiers

PMID32650368
PMCPMC7397020
OpenAlexW3039439043

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.