Evidence map›Paper›PMID 32661334›Full record

ArticleCell death & disease2020

HOTAIRM1 regulates neuronal differentiation by modulating NEUROGENIN 2 and the downstream neurogenic cascade.

Jessica Rea, Valentina Menci, Paolo Tollis, Tiziana Santini, Alexandros Armaos, Maria Giovanna Garone, Federica Iberite, Andrea Cipriano, Gian Gaetano Tartaglia, Alessandro Rosa and 3 more

Open access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
5.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 84 citations in OpenAlex.

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  19. A conservedRNA biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 3 countries.

Jessica ReaDepartment of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, Rome, Italy.
Valentina MenciDepartment of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, Rome, Italy.
Paolo TollisDepartment of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, Rome, Italy.
Tiziana SantiniCenter for Life Nano Science@Sapienza, Istituto Italiano di Tecnologia, Rome, Italy.
Alexandros ArmaosCentre for Genomic Regulation, The Barcelona Institute for Science and Technology, Barcelona, Spain.
Maria Giovanna GaroneDepartment of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, Rome, Italy.
Federica IberiteDepartment of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, Rome, Italy.ORCID http://orcid.org/0000-0003-1876-9734
Andrea CiprianoDepartment of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, Rome, Italy.
Gian Gaetano TartagliaDepartment of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, Rome, Italy.
Alessandro RosaDepartment of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, Rome, Italy.ORCID http://orcid.org/0000-0001-9999-7223
Monica BallarinoDepartment of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, Rome, Italy.
Pietro LaneveInstitute of Molecular Biology and Pathology, National Research Council, Rome, Italy. pietro.laneve@cnr.it.
Elisa CaffarelliInstitute of Molecular Biology and Pathology, National Research Council, Rome, Italy. elisa.caffarelli@cnr.it.
Sapienza University of Rome · ITInstitute of Molecular Biology and Pathology · ITItalian Institute of Technology · ITBarcelona Institute of Science and Technology · ESInstitució Catalana de Recerca i Estudis Avançats · ESNouscom (Italy) · ITScuola Superiore Sant'Anna · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neuronal differentiation is a timely and spatially regulated process, relying on precisely orchestrated gene expression control. The sequential activation/repression of genes driving cell fate specification is achieved by complex regulatory networks, where transcription factors and noncoding RNAs work in a coordinated manner. Herein, we identify the long noncoding RNA HOTAIRM1 (HOXA Transcript Antisense RNA, Myeloid-Specific 1) as a new player in neuronal differentiation. We demonstrate that the neuronal-enriched HOTAIRM1 isoform epigenetically controls the expression of the proneural transcription factor NEUROGENIN 2 that is key to neuronal fate commitment and critical for brain development. We also show that HOTAIRM1 activity impacts on NEUROGENIN 2 downstream regulatory cascade, thus contributing to the achievement of proper neuronal differentiation timing. Finally, we identify the RNA-binding proteins HNRNPK and FUS as regulators of HOTAIRM1 biogenesis and metabolism. Our findings uncover a new regulatory layer underlying NEUROGENIN 2 transitory expression in neuronal differentiation and reveal a previously unidentified function for the neuronal-induced long noncoding RNA HOTAIRM1.

Indexed as

Basic Helix-Loop-Helix ProteinsCell DifferentiationCell Line, TumorEpigenesis, GeneticGene SilencingHeterogeneous-Nuclear Ribonucleoprotein KHumansMicroRNAsNerve Tissue ProteinsNeuronsProteomicsRNA-Binding Protein FUSTranscription FactorsTransfectionBasic Helix-Loop-Helix ProteinsFUS protein, humanHeterogeneous-Nuclear Ribonucleoprotein KHNRNPK protein, humanlong non-coding RNA HOTAIRM1, humanMicroRNAsNerve Tissue ProteinsNEUROG2 protein, humanRNA-Binding Protein FUSTranscription Factors

Identifiers

PMID32661334
PMCPMC7359305
OpenAlexW3042137552

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.