Evidence map›Paper›PMID 32724080›Full record

ArticleScientific reports2020

Hepatocytic transcriptional signatures predict comparative drug interaction potential of rifamycin antibiotics.

Shetty Ravi Dyavar, Timothy M Mykris, Lee C Winchester, Kimberly K Scarsi, Courtney V Fletcher, Anthony T Podany

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 18 citations in OpenAlex.

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  11. Management of Drug-Drug Interactions Between Long-Acting Cabotegravir and Rilpivirine and Comedications With Inducing Properties: A Modeling Study.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Shetty Ravi DyavarAntiviral Pharmacology Laboratory, University of Nebraska Medical Center (UNMC) Center for Drug Discovery UNMC, Omaha, NE, 68198, USA. shettyravi.dyavar@unmc.edu.
Timothy M MykrisAntiviral Pharmacology Laboratory, University of Nebraska Medical Center (UNMC) Center for Drug Discovery UNMC, Omaha, NE, 68198, USA.
Lee C WinchesterAntiviral Pharmacology Laboratory, University of Nebraska Medical Center (UNMC) Center for Drug Discovery UNMC, Omaha, NE, 68198, USA.
Kimberly K ScarsiAntiviral Pharmacology Laboratory, University of Nebraska Medical Center (UNMC) Center for Drug Discovery UNMC, Omaha, NE, 68198, USA.
Courtney V FletcherAntiviral Pharmacology Laboratory, University of Nebraska Medical Center (UNMC) Center for Drug Discovery UNMC, Omaha, NE, 68198, USA.
Anthony T PodanyAntiviral Pharmacology Laboratory, University of Nebraska Medical Center (UNMC) Center for Drug Discovery UNMC, Omaha, NE, 68198, USA. apodany@unmc.edu.
University of Nebraska Medical Center · US

Funding

Therapeutics Core (Page 286)P30MH062261 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI FOX, HOWARD S · 2000 to 2021
$37.7M
The Lymphoid Tissue Pharmacology of Antiretroviral DrugsR01AI124965 · NIAID · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI FLETCHER, COURTNEY V · 2016 to 2020
$3.7M
Pharmacological Strategies to use the Levonorgestrel Implant in HIV-infected WomenR01HD085887 · NICHD · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SCARSI, KIMBERLY K. · 2015 to 2020
$1.4M
Clinical Pharmacology of Efavirenz Combined with High Dose RifapentineK23AI134307 · NIAID · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI PODANY, ANTHONY T · 2018 to 2022
$819k
NIAID NIH HHS 1K23AI134307-01A1NIAID NIH HHS K23 AI134307NIAID NIH HHS R01 AI124965NIAID NIH HHS R01-AI124965NICHD NIH HHS R01 HD085887NIMH NIH HHS P30 MH062261
6 · The paper itself

Abstract

Current strategies to treat tuberculosis (TB) and co-morbidities involve multidrug combination therapies. Rifamycin antibiotics are a key component of TB therapy and a common source of drug-drug interactions (DDIs) due to induction of drug metabolizing enzymes (DMEs). Management of rifamycin DDIs are complex, particularly in patients with co-morbidities, and differences in DDI potential between rifamycin antibiotics are not well established. DME profiles induced in response to tuberculosis antibiotics (rifampin, rifabutin and rifapentine) were compared in primary human hepatocytes. We identified rifamycin induced DMEs, cytochrome P450 (CYP) 2C8/3A4/3A5, SULT2A, and UGT1A4/1A5 and predicted lower DDIs of rifapentine with 58 clinical drugs used to treat co-morbidities in TB patients. Transcriptional networks and upstream regulator analyses showed FOXA3, HNF4α, NR1I2, NR1I3, NR3C1 and RXRα as key transcriptional regulators of rifamycin induced DMEs. Our study findings are an important resource to design effective medication regimens to treat common co-conditions in TB patients.

Indexed as

Antitubercular AgentsConstitutive Androstane ReceptorCytochrome P-450 Enzyme SystemDrug InteractionsHepatocytesHumansRifamycinsSulfotransferasesTuberculosisalcohol sulfotransferaseAntitubercular AgentsConstitutive Androstane ReceptorCytochrome P-450 Enzyme SystemNR1I3 protein, humanRifamycinsSulfotransferases

Identifiers

PMID32724080
PMCPMC7387492
OpenAlexW3045676066

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.