Evidence map›Paper›PMID 32737079›Full record

ArticleLife science alliance2020

A time-resolved interaction analysis of Bem1 reconstructs the flow of Cdc42 during polar growth.

Sören Grinhagens, Alexander Dünkler, Yehui Wu, Lucia Rieger, Philipp Brenner, Thomas Gronemeyer, Medhanie A Mulaw, Nils Johnsson

Open access · goldAbstract read
In one paragraph

Article in Life science alliance, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sören GrinhagensDepartment of Biology, Institute of Molecular Genetics and Cell Biology, Ulm University, Ulm, Germany.
Alexander DünklerDepartment of Biology, Institute of Molecular Genetics and Cell Biology, Ulm University, Ulm, Germany.
Yehui WuDepartment of Biology, Institute of Molecular Genetics and Cell Biology, Ulm University, Ulm, Germany.
Lucia RiegerDepartment of Biology, Institute of Molecular Genetics and Cell Biology, Ulm University, Ulm, Germany.
Philipp BrennerDepartment of Biology, Institute of Molecular Genetics and Cell Biology, Ulm University, Ulm, Germany.ORCID 0000-0001-5785-470X
Thomas GronemeyerDepartment of Biology, Institute of Molecular Genetics and Cell Biology, Ulm University, Ulm, Germany.
Medhanie A MulawComprehensive Cancer Center Ulm, Institute of Experimental Cancer Research, Ulm University, Ulm, Germany.
Nils JohnssonDepartment of Biology, Institute of Molecular Genetics and Cell Biology, Ulm University, Ulm, Germany nils.johnsson@uni-ulm.de.ORCID 0000-0003-1416-835X
Universität Ulm · DEUniversity Hospital Ulm · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cdc42 organizes cellular polarity and directs the formation of cellular structures in many organisms. By locating Cdc24, the source of active Cdc42, to the growing front of the yeast cell, the scaffold protein Bem1, is instrumental in shaping the cellular gradient of Cdc42. This gradient instructs bud formation, bud growth, or cytokinesis through the actions of a diverse set of effector proteins. To address how Bem1 participates in these transformations, we systematically tracked its protein interactions during one cell cycle to define the ensemble of Bem1 interaction states for each cell cycle stage. Mutants of Bem1 that interact with only a discrete subset of the interaction partners allowed to assign specific functions to different interaction states and identified the determinants for their cellular distributions. The analysis characterizes Bem1 as a cell cycle-specific shuttle that distributes active Cdc42 from its source to its effectors. It further suggests that Bem1 might convert the PAKs Cla4 and Ste20 into their active conformations.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid Sequencecdc42 GTP-Binding Proteincdc42 GTP-Binding Protein, Saccharomyces cerevisiaeCell CycleCell Cycle ProteinsCell DivisionCell PolarityGuanine Nucleotide Exchange FactorsProtein BindingProtein Serine-Threonine KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSaccharomycetalesAdaptor Proteins, Signal TransducingBEM1 protein, S cerevisiaecdc42 GTP-Binding Proteincdc42 GTP-Binding Protein, Saccharomyces cerevisiaeCell Cycle ProteinsGuanine Nucleotide Exchange FactorsProtein Serine-Threonine KinasesSaccharomyces cerevisiae Proteins

Identifiers

PMID32737079
PMCPMC7409549
OpenAlexW3046615096

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.