Evidence map›Paper›PMID 32754863›Full record

ArticleMolecular biology reports2020

In vitro evidence of NLRP3 inflammasome regulation by histone demethylase LSD2 in renal cancer: a pilot study.

Aman Kumar, Nayudu Nallabelli, Ujjawal Sharma, Niti Kumari, Shrawan Kumar Singh, Nandita Kakkar, Rajendra Prasad

Abstract read
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In one paragraph

Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Aman KumarDepartment of Biochemistry, Postgraduate Institute of Medical Education and Research, Chandigarh, 160012, India.
Nayudu NallabelliDepartment of Ophthalmology, Postgraduate Institute of Medical Education and Research, Chandigarh, India.
Ujjawal SharmaDepartment of Biochemistry, Postgraduate Institute of Medical Education and Research, Chandigarh, 160012, India.
Niti KumariDepartment of Biochemistry, Postgraduate Institute of Medical Education and Research, Chandigarh, 160012, India.
Shrawan Kumar SinghDepartment of Urology, Postgraduate Institute of Medical Education and Research, Chandigarh, India.
Nandita KakkarDepartment of Histopathology, Postgraduate Institute of Medical Education and Research, Chandigarh, India.
Rajendra PrasadDepartment of Biochemistry, Postgraduate Institute of Medical Education and Research, Chandigarh, 160012, India. fateh1977@yahoo.com.
Post Graduate Institute of Medical Education and Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NLRP3 pathway plays a vital role in the pathogenesis of different human cancers but still the regulation of NLRP3 pathway largely unknown. Therefore, we examined the levels of NLRP3 and its downstream components (caspase-1 and IL-1β) and its relationship with histone modifiers in renal cancer pathogenesis. Total 30 cases of clear cell renal cell carcinoma (ccRCC), were studied for NLRP3, caspase-1 and IL-1β expression using real-time PCR, which showed the augmented levels of all the three components of NLRP3 inflammasome pathway in ccRCC. Next, role of the FAD dependent monoamine oxidases (LSD2) and jumonji C (JmjC)-domain-containing, iron-dependent dioxygenases (KDM5A) histone demethylases were evaluated in regulation of NLRP3 inflammasome pathway in-vitro using RCC cell line. It was observed that silencing of KDM5A didn't alter the levels of neither of the NLRP3 component but inhibition of LSD2 showed significant effect on NLRP3 expression while no change in caspase-1 and IL-1β levels. This study suggests that rather LSD2 not KDM5A lysine demethylase family might be involved in the regulation of NLRP3 inflammasome in cancer cells which could be useful for deciphering the future therapeutic targets for the disease.

Indexed as

Gene Expression Regulation, EnzymologicGene Expression Regulation, NeoplasticCarcinoma, Renal CellFemaleHistone DemethylasesHumansInflammasomesKidney NeoplasmsMaleMiddle AgedNeoplasm ProteinsNLR Family, Pyrin Domain-Containing 3 ProteinPilot ProjectsHistone DemethylasesInflammasomesKDM1B protein, humanNeoplasm ProteinsNLR Family, Pyrin Domain-Containing 3 ProteinNLRP3 protein, humanEpigeneticsHistone modifiersInflammasomeKDM5ALSD2NLRP3

Identifiers

PMID32754863
OpenAlexW3047602940

What Socratic holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.