Evidence map›Paper›PMID 32764543›Full record

ArticleNature communications2020

Nanoproteomics enables proteoform-resolved analysis of low-abundance proteins in human serum.

Timothy N Tiambeng, David S Roberts, Kyle A Brown, Yanlong Zhu, Bifan Chen, Zhijie Wu, Stanford D Mitchell, Tania M Guardado-Alvarez, Song Jin, Ying Ge

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 68 citations in OpenAlex.

  1. Review
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  8. Review
  9. Article
  10. A Nanorobotics-Based Approach of Breast Cancer in the Nanotechnology Era.International journal of molecular sciences · 2024
    Review
  11. Top-down proteomics.Nature reviews. Methods primers · 2024
    Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Distinct core glycan andChemical science · 2022
    Article
  20. Engineered nanoparticles enable deep proteomics studies at scale by leveraging tunable nano-bio interactions.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Timothy N Tiambeng *Department of Chemistry, University of Wisconsin-Madison, Madison, WI, 53719, USA.
David S Roberts *Department of Chemistry, University of Wisconsin-Madison, Madison, WI, 53719, USA.ORCID http://orcid.org/0000-0002-0478-4987
Kyle A BrownDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, 53719, USA.
Yanlong ZhuHuman Proteomics Program, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, 53719, USA.ORCID http://orcid.org/0000-0003-4909-7336
Bifan ChenDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, 53719, USA.
Zhijie WuDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, 53719, USA.ORCID http://orcid.org/0000-0002-9981-8114
Stanford D MitchellDepartment of Cell and Regenerative Biology, University of Wisconsin-Madison, Madison, WI, 53719, USA.
Tania M Guardado-AlvarezDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, 53719, USA.
Song JinDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, 53719, USA. jin@chem.wisc.edu.ORCID http://orcid.org/0000-0001-8693-7010
Ying GeDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, 53719, USA. ying.ge@wisc.edu.ORCID http://orcid.org/0000-0001-5211-6812
University of Wisconsin–Madison · USUniversity of Wisconsin System · US

Funding

Training Program in Translational Cardiovascular Science (TPTCS)T32HL007936 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Lee Lochbaum Eckhardt, Gail A Robertson · 2001 to 2026
$11.6M
Chemistry-Biology Interface Training ProgramT32GM008505 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BLACKWELL, HELEN E. · 1993 to 2023
$9.8M
Training Program In Molecular AND Cellular PharmacologyT32GM008688 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 1998 to 2020
$6.0M
Top Down Proteomics Of Myofilaments In Heart FailureR01HL096971 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING · 2011 to 2021
$3.3M
Enabling Top-Down Proteomics through Materials Chemistry and NanotechnologyR01GM117058 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING, JIN, SONG · 2015 to 2023
$2.7M
Ultra High Resolution Mass Spectrometer for Biomedical ResearchS10OD018475 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING · 2015 to 2015
$2.0M
MASH Explorer, a Comprehensive Software Environment for Top-Down ProteomicsR01GM125085 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING · 2018 to 2021
$1.2M
NHLBI NIH HHS R01 HL096971NHLBI NIH HHS T32 HL007936NIGMS NIH HHS R01 GM117058NIGMS NIH HHS R01 GM125085NIGMS NIH HHS T32 GM008505NIGMS NIH HHS T32 GM008688NIH HHS S10 OD018475
6 · The paper itself

Abstract

Top-down mass spectrometry (MS)-based proteomics provides a comprehensive analysis of proteoforms to achieve a proteome-wide understanding of protein functions. However, the MS detection of low-abundance proteins from blood remains an unsolved challenge due to the extraordinary dynamic range of the blood proteome. Here, we develop an integrated nanoproteomics method coupling peptide-functionalized superparamagnetic nanoparticles (NPs) with top-down MS for the enrichment and comprehensive analysis of cardiac troponin I (cTnI), a gold-standard cardiac biomarker, directly from serum. These NPs enable the sensitive enrichment of cTnI (<1 ng/mL) with high specificity and reproducibility, while simultaneously depleting highly abundant proteins such as human serum albumin (>10

Indexed as

BiomarkersBlood Chemical AnalysisBlood ProteinsHumansMagnetite NanoparticlesMass SpectrometryNanotechnologyProtein Processing, Post-TranslationalProteomeProteomicsReproducibility of ResultsSerum Albumin, HumanTroponin IBiomarkersBlood ProteinsMagnetite NanoparticlesProteomeSerum Albumin, HumanTNNI3 protein, humanTroponin I

Identifiers

PMID32764543
PMCPMC7411019
OpenAlexW3047360653

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.