Evidence map›Paper›PMID 32802855›Full record

ArticleBioMed research international2020

Identification of Potential Prognostic Biomarkers for Breast Cancer Based on lncRNA-TF-Associated ceRNA Network and Functional Module.

Xinrong Li, Junquan Zhu, Jian Qiu

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 62% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Xinrong LiDepartment of Integrative Medicine & Medical Oncology, Shengzhou People's Hospital (The First Affiliated Hospital of Zhejiang University Shengzhou Branch), 312400, Shengzhou, Zhejiang, China.ORCID https://orcid.org/0000-0002-3188-2929
Junquan ZhuDepartment of Integrative Medicine & Medical Oncology, Shengzhou People's Hospital (The First Affiliated Hospital of Zhejiang University Shengzhou Branch), 312400, Shengzhou, Zhejiang, China.ORCID https://orcid.org/0000-0003-1807-4203
Jian QiuDepartment of Integrative Medicine & Medical Oncology, Shengzhou People's Hospital (The First Affiliated Hospital of Zhejiang University Shengzhou Branch), 312400, Shengzhou, Zhejiang, China.ORCID https://orcid.org/0000-0003-2221-8230
Sheng Jing Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breast cancer leads to most of cancer deaths among women worldwide. Systematically analyzing the competing endogenous RNA (ceRNA) network and their functional modules may provide valuable insight into the pathogenesis of breast cancer. In this study, we constructed a lncRNA-TF-associated ceRNA network via combining all the significant lncRNA-TF ceRNA pairs and TF-TF PPI pairs. We computed important topological features of the network, such as degree and average path length. Hub nodes in the lncRNA-TF-associated ceRNA network were extracted to detect differential expression in different subtypes and tumor stages of breast cancer. MCODE was used for identifying the closely connected modules from the ceRNA network. Survival analysis was further used for evaluating whether the modules had prognosis effects on breast cancer. TF motif searching analysis was performed for investigating the binding potentials between lncRNAs and TFs. As a result, a lncRNA-TF-associated ceRNA network in breast cancer was constructed, which had a scale-free property. Hub nodes such as

Indexed as

Biomarkers, TumorBreast NeoplasmsDatabases, Nucleic AcidGene Expression Regulation, NeoplasticNeoplasm ProteinsRNA, Long NoncodingRNA, NeoplasmTranscription FactorsFemaleGene Regulatory NetworksHumansPrognosisTranscriptomeBiomarkers, TumorNeoplasm ProteinsRNA, Long NoncodingRNA, NeoplasmTranscription Factors

Identifiers

PMID32802855
PMCPMC7411464
OpenAlexW3045955236

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.