Evidence map›Paper›PMID 32802896›Full record

ReviewJournal of immunology research2020

The Application of Single-Cell RNA Sequencing in Vaccinology.

Andrés Noé, Tamsin N Cargill, Carolyn M Nielsen, Andrew J C Russell, Eleanor Barnes

Open access · goldAbstract readReview
In one paragraph

Review in Journal of immunology research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Andrés NoéThe Jenner Institute, University of Oxford, Old Road Campus Research Building, Oxford OX3 7DQ, UK.ORCID https://orcid.org/0000-0002-6408-7032
Tamsin N CargillPeter Medawar Building for Pathogen Research and Oxford NIHR Biomedical Research Centre, Nuffield Department of Medicine, University of Oxford, South Parks Road, Oxford OX1 3SY, UK.
Carolyn M NielsenThe Jenner Institute, University of Oxford, Old Road Campus Research Building, Oxford OX3 7DQ, UK.
Andrew J C RussellWellcome Sanger Institute, Wellcome Genome Campus, Cambridge CB10 1SA, UK.
Eleanor BarnesPeter Medawar Building for Pathogen Research and Oxford NIHR Biomedical Research Centre, Nuffield Department of Medicine, University of Oxford, South Parks Road, Oxford OX1 3SY, UK.
John Radcliffe Hospital · GBUniversity of Oxford · GBWellcome Sanger Institute · GB

Funding

Medical Research Council MR/K010239/1Wellcome Trust
6 · The paper itself

Abstract

Single-cell RNA sequencing allows highly detailed profiling of cellular immune responses from limited-volume samples, advancing prospects of a new era of systems immunology. The power of single-cell RNA sequencing offers various opportunities to decipher the immune response to infectious diseases and vaccines. Here, we describe the potential uses of single-cell RNA sequencing methods in prophylactic vaccine development, concentrating on infectious diseases including COVID-19. Using examples from several diseases, we review how single-cell RNA sequencing has been used to evaluate the immunological response to different vaccine platforms and regimens. By highlighting published and unpublished single-cell RNA sequencing studies relevant to vaccinology, we discuss some general considerations how the field could be enriched with the widespread adoption of this technology.

Indexed as

Single-Cell AnalysisAnimalsBetacoronavirusCell LineClinical Trials as TopicCoronavirus InfectionsCOVID-19Disease Models, AnimalDrug Evaluation, PreclinicalHost-Pathogen InteractionsHumansImmunity, CellularImmunity, InnateImmunogenicity, VaccinePandemicsPneumonia, ViralRNA, ViralViral Vaccines

Identifiers

PMID32802896
PMCPMC7411487
OpenAlexW3047669619

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.