Evidence map›Paper›PMID 32807983›Full record

ReviewNature reviews. Nephrology2020

Rare genetic causes of complex kidney and urological diseases.

Emily E Groopman, Gundula Povysil, David B Goldstein, Ali G Gharavi

Open access · greenAbstract readReview
In one paragraph

Review in Nature reviews. Nephrology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Chronic kidney disease in children: an update.Clinical kidney journal · 2023
    Review
  13. Review
  14. Article
  15. Article
  16. Organ defects of the Usp7Biomedical journal · 2023
    Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Emily E GroopmanDivision of Nephrology, Columbia University College of Physicians and Surgeons, New York, NY, USA.
Gundula PovysilInstitute for Genomic Medicine, Columbia University, New York, NY, USA.ORCID http://orcid.org/0000-0003-4625-5909
David B GoldsteinInstitute for Genomic Medicine, Columbia University, New York, NY, USA.ORCID http://orcid.org/0000-0002-1111-2820
Ali G GharaviDivision of Nephrology, Columbia University College of Physicians and Surgeons, New York, NY, USA. ag2239@cumc.columbia.edu.ORCID http://orcid.org/0000-0003-2801-233X
Columbia University · USColumbia University Irving Medical Center · US

Funding

Transcriptional Regulation of Urothelial Differentiation During Homeostasis and Repair in Response to Urinary Tract InfectionU54DK104309 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI JONATHAN M. BARASCH, ALI G GHARAVI · 2014 to 2026
$17.7M
Elucidating IgA Nephropathy through Genetic Studies of IgA1 GlycosylationR01DK082753 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GHARAVI, ALI G, NOVAK, JAN · 2009 to 2024
$8.7M
Genetics of Renal HypodyslasiaR01DK080099 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GHARAVI, ALI G · 2008 to 2023
$6.3M
Utility of Genomic Diagnostics for Chronic Kidney DiseaseF30DK116473 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GROOPMAN, EMILY EVE · 2017 to 2021
$133k
NIDDK NIH HHS F30 DK116473NIDDK NIH HHS R01 DK080099NIDDK NIH HHS R01 DK082753NIDDK NIH HHS U54 DK104309
6 · The paper itself

Abstract

Although often considered a single-entity, chronic kidney disease (CKD) comprises many pathophysiologically distinct disorders that result in persistently abnormal kidney structure and/or function, and encompass both monogenic and polygenic aetiologies. Rare inherited forms of CKD frequently span diverse phenotypes, reflecting genetic phenomena including pleiotropy, incomplete penetrance and variable expressivity. Use of chromosomal microarray and massively parallel sequencing technologies has revealed that genomic disorders and monogenic aetiologies contribute meaningfully to seemingly complex forms of CKD across different clinically defined subgroups and are characterized by high genetic and phenotypic heterogeneity. Investigations of prevalent genomic disorders in CKD have integrated genetic, bioinformatic and functional studies to pinpoint the genetic drivers underlying their renal and extra-renal manifestations, revealing both monogenic and polygenic mechanisms. Similarly, massively parallel sequencing-based analyses have identified gene- and allele-level variation that contribute to the clinically diverse phenotypes observed for many monogenic forms of nephropathy. Genome-wide sequencing studies suggest that dual genetic diagnoses are found in at least 5% of patients in whom a genetic cause of disease is identified, highlighting the fact that complex phenotypes can also arise from multilocus variation. A multifaceted approach that incorporates genetic and phenotypic data from large, diverse cohorts will help to elucidate the complex relationships between genotype and phenotype for different forms of CKD, supporting personalized medicine for individuals with kidney disease.

Indexed as

Precision MedicineChromosome MappingGenotypeHigh-Throughput Nucleotide SequencingHumansPhenotypeRenal Insufficiency, ChronicUrologic Diseases

Identifiers

PMID32807983
PMCPMC7772719
OpenAlexW3049359784

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.