Evidence map›Paper›PMID 32824688›Full record

ArticleInternational journal of molecular sciences2020

Oxidant-Induced Alterations in the Adipocyte Transcriptome: Role of the Na,K-ATPase Oxidant Amplification Loop.

Komal Sodhi, James Denvir, Jiang Liu, Juan R Sanabria, Yiliang Chen, Roy Silverstein, Zijian Xie, Nader G Abraham, Joseph I Shapiro

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Komal SodhiDepartments of Medicine, Surgery, and Biomedical Sciences, Joan C. Edwards School of Medicine, Marshall University, Huntington, WV 25755, USA.ORCID 0000-0002-1179-2985
James DenvirDepartments of Medicine, Surgery, and Biomedical Sciences, Joan C. Edwards School of Medicine, Marshall University, Huntington, WV 25755, USA.
Jiang LiuDepartments of Medicine, Surgery, and Biomedical Sciences, Joan C. Edwards School of Medicine, Marshall University, Huntington, WV 25755, USA.ORCID 0000-0002-0654-707X
Juan R SanabriaDepartments of Medicine, Surgery, and Biomedical Sciences, Joan C. Edwards School of Medicine, Marshall University, Huntington, WV 25755, USA.
Yiliang ChenDepartment of Medicine, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Roy SilversteinDepartment of Medicine, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Zijian XieDepartments of Medicine, Surgery, and Biomedical Sciences, Joan C. Edwards School of Medicine, Marshall University, Huntington, WV 25755, USA.
Nader G AbrahamDepartments of Medicine and Pharmacology, New York Medical College, Valhalla, NY 10595, USA.ORCID 0000-0001-8983-1959
Joseph I ShapiroDepartments of Medicine, Surgery, and Biomedical Sciences, Joan C. Edwards School of Medicine, Marshall University, Huntington, WV 25755, USA.
Marshall University · USMedical College of Wisconsin · USNew York Medical College · US

Funding

West Virginia IDEA-CTRU54GM104942 · NIGMS · WEST VIRGINIA UNIVERSITY · PI Sijin Wen · 2012 to 2026
$81.0M
Role of Adipocyte Na/K-ATPase Signaling in the Development and Progression of Uremic Cardiomyopathy By Altering Adipocyte PhenotypeR15HL150721 · NHLBI · MARSHALL UNIVERSITY · PI SODHI, KOMAL · 2020 to 2020
$444k
COBRE ACCORD 1P20GM121299NHLBI NIH HHS R15 HL150721NIGMS NIH HHS U54 GM104942NIH HHS 1R15DK106666NIH HHS HL071556NIH HHS HL105649NIH HHS HL109015NIH HHS HL34300NIH HHS HL55601WV-CTSI 2U54GM104942WV-INBRE NIH/NIGMS P20GM103434
6 · The paper itself

Abstract

(1) Background: Recently we have noted that adipocyte specific expression of the peptide, NaKtide, which was developed to attenuate the Na,K-ATPase oxidant amplification loop, could ameliorate the phenotypical features of uremic cardiomyopathy. We performed this study to better characterize the cellular transcriptomes that are involved in various biological pathways associated with adipocyte function occurring with renal failure. (2) Methods: RNAseq was performed on the visceral adipose tissue of animals subjected to partial nephrectomy. Specific expression of NaKtide in adipocytes was achieved using an adiponectin promoter. To better understand the cause of gene expression changes in vivo, 3T3L1 adipocytes were exposed to indoxyl sulfate (IS) or oxidized low density lipoprotein (oxLDL), with and without pNaKtide (the cell permeant form of NaKtide). RNAseq was also performed on these samples. (3) Results: We noted a large number of adipocyte genes were altered in experimental renal failure. Adipocyte specific NaKtide expression reversed most of these abnormalities. High correlation with some cardiac specific phenotypical features was noted amongst groups of these genes. In the murine adipocytes, both IS and oxLDL induced similar pathway changes as were noted in vivo, and pNaKtide appeared to reverse these changes. Network analysis demonstrated tremendous similarities between the network revealed by gene expression analysis with IS compared with oxLDL, and the combined in vitro dataset was noted to also have considerable similarity to that seen in vivo with experimental renal failure. (4) Conclusions: This study suggests that the myriad of phenotypical features seen with experimental renal failure may be fundamentally linked to oxidant stress within adipocytes.

Indexed as

Oxidative StressTranscriptome3T3 CellsAdipocytesAnimalsGene Regulatory NetworksIndicanLipoproteins, LDLMaleMiceMice, Inbred C57BLPeptide FragmentsSodium-Potassium-Exchanging ATPaseIndicanLipoproteins, LDLNaKtidePeptide FragmentsSodium-Potassium-Exchanging ATPaseadipocyteschronic renal failureNa,K-ATPaseoxidative stressRNA sequencinguremic cardiomyopathy

Identifiers

PMID32824688
PMCPMC7460641
OpenAlexW3056976966

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.