Evidence map›Paper›PMID 32849388›Full record

ArticleFrontiers in microbiology2020

Integrated Analysis of microRNA-mRNA Expression in Mouse Lungs Infected With H7N9 Influenza Virus: A Direct Comparison of Host-Adapting PB2 Mutants.

Yanna Guo, Nan Huang, Miao Tian, Menglu Fan, Qingzheng Liu, Zhiyuan Liu, Tongtong Sun, Jingjin Huang, Huizhi Xia, Yongzhen Zhao and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Yanna GuoMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Nan HuangMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Miao TianMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Menglu FanMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Qingzheng LiuMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Zhiyuan LiuMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Tongtong SunMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Jingjin HuangMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Huizhi XiaMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Yongzhen ZhaoMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Jihui PingMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology, Nanjing Agricultural University, Nanjing, China.
Nanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNAs (miRNAs) are important regulators involved in the antiviral response to influenza virus infection, however, an analytical comparison of miRNA and mRNA expression changes induced by several H7N9 host-adapting PB2 mutants remains undone. Here, miRNA microarray and transcriptome sequencing of BALB/c mouse lungs infected with A/Anhui/1/2013 (H7N9) [hereafter referred to as H7N9/AH1-PB2-627K(WT)] and mutant variants with PB2 amino acid substitutions (avian-like H7N9/AH1-PB2-627E and mammalian-adapted H7N9/AH1-PB2-627E/701N) were directly compared. The results showed that influenza virus infection induced dysregulation of numerous host cell processes. In a miRNA-mRNA network associated with immunity, changes in the expression of 38 miRNAs and 58 mRNAs were detected following influenza virus infection. Notably, the miRNAs of mmu-miR-188-5p, mmu-miR-511-5p, mmu-miR-483-5p, and mmu-miR-690 were specifically associated with the replication of the avian-like virus H7N9/AH1-PB2-627E. Likewise, the miRNAs of mmu-miR-691, mmu-miR-329-3p, and mmu-miR-144-3p were specifically associated with the mammalian-adapted virus H7N9/AH1-PB2-627E/701N. Finally, the miRNAs of mmu-miR-98-5p, mmu-miR-103-3p, mmu-miR-199a-5p, and mmu-miR-378a-3p were specifically associated with H7N9/AH1-PB2-627K(WT) virus replication. This is the first report of comparative integration analysis of miRNA-mRNA expression of these three H7N9 influenza viruses with different host-adapting PB2 mutations. Our results highlight potential miRNAs of importance in influenza virus pathogenesis.

Indexed as

expression profileinfluenza virusmiRNAmiRNA microarraytranscriptome sequencing

Identifiers

PMID32849388
PMCPMC7399063
OpenAlexW3045592999

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.