Evidence map›Paper›PMID 32859694›Full record

ArticleRNA (New York, N.Y.)2020

Interrogation of highly structured RNA with multicomponent deoxyribozyme probes at ambient temperatures.

Adam J Reed, Ryan J Sapia, Charles Dowis, Sheila Solarez, Yulia V Gerasimova

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. DNA Nanomachine (DNM) Biplex Assay for DifferentiatingInternational journal of molecular sciences · 2023
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Adam J ReedChemistry Department, University of Central Florida, Orlando, Florida 32765, USA.
Ryan J SapiaChemistry Department, University of Central Florida, Orlando, Florida 32765, USA.
Charles DowisChemistry Department, University of Central Florida, Orlando, Florida 32765, USA.
Sheila SolarezChemistry Department, University of Central Florida, Orlando, Florida 32765, USA.
Yulia V GerasimovaChemistry Department, University of Central Florida, Orlando, Florida 32765, USA.ORCID 0000-0001-8804-9770
University of Central Florida · US

Funding

Point-of-care detection of TB and NTM pathogens with Fluorescent Deoxyribozyme Sensors and 3D-printed, battery powered device.R01AI149468 · NIAID · UNIVERSITY OF CENTRAL FLORIDA · PI GERASIMOVA, YULIA, ROHDE, KYLE H · 2020 to 2023
$587k
NIAID NIH HHS R01 AI149468
6 · The paper itself

Abstract

Molecular analysis of RNA through hybridization with sequence-specific probes is challenging due to the intrinsic ability of RNA molecules to form stable secondary and tertiary structures. To overcome the energy barrier toward the probe-RNA complex formation, the probes are made of artificial nucleotides, which are more expensive than their natural counterparts and may still be inefficient. Here, we propose the use of a multicomponent probe based on an RNA-cleaving deoxyribozyme for the analysis of highly structured RNA targets. Efficient interrogation of two native RNA from

Indexed as

TemperatureBase SequenceDNA, CatalyticNucleic Acid ConformationNucleic Acid HybridizationRNA, FungalRNA ProbesRNA, RibosomalRNA, Ribosomal, 18SRNA, TransferSaccharomyces cerevisiaeDNA, CatalyticRNA, FungalRNA ProbesRNA, RibosomalRNA, Ribosomal, 18SRNA, ribosomal, 26SRNA, Transferdeoxyribozymemulticomponent probesnucleic acid analysisrRNAstructured RNAtRNA

Identifiers

PMID32859694
PMCPMC7668264
OpenAlexW3081802740

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.