Evidence map›Paper›PMID 32911570›Full record

Trial reportJournal of leukocyte biology2020

Profiling cellular heterogeneity in asthma with single cell multiparameter CyTOF.

Emma Stewart, Xiaomei Wang, Geoffrey L Chupp, Ruth R Montgomery

Open access · greenAbstract readClinical Trial
In one paragraph

Trial report in Journal of leukocyte biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Underestimation of airway luminal eosinophilia by quantitative sputum cytometry.Allergy, asthma, and clinical immunology : official journal of the Canadian Society of Allergy and Clinical Immunology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Emma StewartDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut, USA.
Xiaomei WangDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut, USA.
Geoffrey L ChuppDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut, USA.
Ruth R MontgomeryDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut, USA.ORCID 0000-0002-8661-4454
Yale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Longitudinal Analysis of Transcriptomic Endophenotypes in AsthmaR01HL118346 · NHLBI · YALE UNIVERSITY · PI CHUPP, GEOFFREY L · 2013 to 2016
$3.3M
Gene Expression Profiling in Asthma Severity: CHI3L1 Genotypes and Serum YKL-40R01HL095390 · NHLBI · YALE UNIVERSITY · PI CHUPP, GEOFFREY L · 2008 to 2011
$3.2M
SPLUNC1 and Neutrophilic Inflammation in Cystic FibrosisK01HL125514 · NHLBI · YALE UNIVERSITY · PI BRITTO-LEON, CLEMENTE · 2015 to 2021
$905k
Inner-City Asthma Consortium-266025496-266025496N01AI025496 · NIAID · UNIVERSITY OF WISCONSIN · PI BUSSE, WILLIAM · 2002 to 2006
–
NCATS NIH HHS UL1 TR001863NHLBI NIH HHS K01 HL125514NHLBI NIH HHS R01 HL095390NHLBI NIH HHS R01 HL118346NIAID NIH HHS HHSN272200900052CNIAID NIH HHS N01 AI025496NIH HHS 1K01HL125514-01NIH HHS ICAC-3NIH HHS R01 HL-095390NIH HHS R01 HL118346
6 · The paper itself

Abstract

Asthma is a chronic inflammatory disease of the airways that afflicts over 30 million individuals in the United States and over 300 million individuals worldwide. The inflammatory response in the airways is often characterized by the analysis of sputum, which contains multiple types of cells including neutrophils, macrophages, lymphocytes, and rare bronchial epithelial cells. Subtyping patients using microscopy of the sputum has identified both neutrophilic and eosinophilic infiltrates in airway inflammation. However, with the extensive heterogeneity among these cell types, a higher resolution understanding of the inflammatory cell types present in the sputum is needed to dissect the heterogeneity of disease. Improved recognition of the distinct phenotypes and sources of inflammation in asthmatic granulocytes may identify relevant pathways for clinical management or investigation of novel therapeutic mediators. Here, we employed mass cytometry or cytometry by time-of-flight to quantify frequency and define functional status of sputum derived airway cells in asthmatic patients and healthy controls. This in-depth single cell analysis method identified multiple distinct subtypes of airway immune cells, especially in neutrophils. Significance was discovered by statistical analysis as well as a data-driven unbiased clustering approach. Our multidimensional assessment method identifies differences in cellular function and supports identification of cellular status that may contribute to diverse clinical responses. This technical advance is relevant for studies of pathogenesis and may provide meaningful insights to advance our knowledge of asthmatic inflammation.

Indexed as

AsthmaLymphocytesMacrophagesNeutrophilsSingle-Cell AnalysisAdultAgedFemaleHumansMaleMiddle AgedSputumdendritic celleosinophilinflammationmass cytometryneutrophil

Identifiers

PMID32911570
PMCPMC8087109
OpenAlexW3084308664

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.