Evidence map›Paper›PMID 33089343›Full record

ArticleJournal of gastroenterology2020

Proteomics analysis identified TPI1 as a novel biomarker for predicting recurrence of intrahepatic cholangiocarcinoma.

Wen-Long Yu, Guanzhen Yu, Hui Dong, Ke Chen, Jun Xie, Hua Yu, Yuan Ji, Guang-Shun Yang, Ai-Jun Li, Wen-Ming Cong and 1 more

Abstract readValidation Study
PubMed Publisher
In one paragraph

Article in Journal of gastroenterology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 38 citations in OpenAlex.

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  7. Single-Cell RNA Sequencing Revealed That the Enrichment of TPI1Journal of hepatocellular carcinoma · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Wen-Long YuDepartment II of Biliary Tract Surgery, Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, 225 Changhai Road, Shanghai, 200438, China.
Guanzhen YuDepartment of Oncology, Longhua Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, NO.725, South Wanping RoadShanghai, Shanghai, 200032, China.
Hui DongDepartment of Pathology, Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, 225 Changhai Road, Shanghai, 200438, China.
Ke ChenDepartment of Pathology, Zhong Shan Hospital, Fudan University, 180 Fenglin Road, Shanghai, 200032, China.
Jun XieThe School of Life Science, Fudan University, 2005 Songhu Road, 200438, Shanghai, China.
Hua YuDepartment of Pathology, Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, 225 Changhai Road, Shanghai, 200438, China.
Yuan JiDepartment of Pathology, Zhong Shan Hospital, Fudan University, 180 Fenglin Road, Shanghai, 200032, China.
Guang-Shun YangDepartment of Hepatic Surgery, Shanghai Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, 225 Changhai Road, Shanghai, 200438, China.
Ai-Jun LiDepartment of Special Treatment II, Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, 225 Changhai Road, Shanghai, 200438, China. ajLihappy@163.com.
Wen-Ming CongDepartment of Pathology, Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, 225 Changhai Road, Shanghai, 200438, China. wmcong@smmu.edu.cn.
Guang-Zhi JinDepartment of Oncology, Tongren Hospital, Shanghai Jiao Tong University School of Medicine, 1111, Xianxia Road, Shanghai, 200336, China. jgzhi@hotmail.com.ORCID http://orcid.org/0000-0001-8961-4196
Second Military Medical University · CNFudan University · CNShanghai Jiao Tong University · CNShanghai University of Traditional Chinese Medicine · CN

Funding

National Natural Science Foundation of China 81472278National Natural Science Foundation of China 81472769National Natural Science Foundation of China 81572856National Natural Science Foundation of China 81972574National S&T Major Project of China 2017ZX10203205001-002
6 · The paper itself

Abstract

backgroundIntrahepatic cholangiocarcinoma (ICC) is the second most common tumor in primary liver cancer, but the prognostic factors associated with long-term outcomes after surgical resection remain poorly defined. This study aimed to develop a novel prognostic classifier for patients with ICC after surgery.

methodsUsing a proteomics approach, we screened tumor markers that up-regulated in ICC tissues, and narrowed down by bioinformatics analysis, western blot and immunohistochemistry. Prognostic markers were identified using Cox regression analyses in primary training cohort and the predictive models for time to recurrence (TTR) were established. The predictive accuracy of predictive model was validated in external validation cohort and prospective validation cohort. MTT assay, clonal formation assay and trans-well assays were used to verify the effect on the proliferation and migration in ICC cell line.

resultsTriosephosphate isomerise (TPI1) was significantly up-regulated in ICC tissues and Kaplan-Meier analysis reveals that higher TPI1 expression was strongly correlated with higher recurrence rate of ICC patients. In the primary training cohort, mean TTR was significantly longer (p < 0.0001) than in the low-risk group (26.9 months for TTR, 95% CI 22.4-31.5) than in the high-risk group (14.5 months for TTR, 95% CI 10.6-18.4). Similar results were observed in two validation cohorts. In addition, a nomogram to predict recurrence was developed. Moreover, Knockdown of TPI1 by shRNA inhibited ICC cell growth, colony information, migration, invasion in vitro.

conclusionsCurrent prognostic models were accurate in predicting recurrence for ICC patients after surgical resection.

Indexed as

Bile Duct NeoplasmsBiomarkers, TumorCell Line, TumorCell MovementCell ProliferationCholangiocarcinomaCohort StudiesFemaleGene Expression Regulation, NeoplasticGene Knockdown TechniquesHumansMaleMiddle AgedNeoplasm Recurrence, LocalNomogramsPrognosisBiomarkers, TumorTriose-Phosphate IsomeraseIntrahepatic cholangiocarcinomaProteomicsRecurrenceTriosephosphate isomerise

Identifiers

PMID33089343
OpenAlexW3093564817

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.