Evidence map›Paper›PMID 33093185›Full record

ArticleG3 (Bethesda, Md.)2020

GWideCodeML: A Python Package for Testing Evolutionary Hypotheses at the Genome-Wide Level.

Laura G Macías, Eladio Barrio, Christina Toft

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. A high-quality genome assembly reveals adaptations underlying glossy, wax-coated leaves in the heat-tolerant wild raspberry Rubus leucanthus.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Laura G MacíasDepartament de Genètica, Universitat de València, Burjassot, Valencia, Spain.ORCID 0000-0002-5700-4462
Eladio BarrioDepartament de Genètica, Universitat de València, Burjassot, Valencia, Spain.ORCID 0000-0003-1024-954X
Christina ToftProgram for Systems Biology of Molecular Interactions and Regulation, Institute for Integrative Systems Biology (I2SysBio; UV-CSIC), Valencia, Spain christina.toft@uv.es.ORCID 0000-0003-1714-6703

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One of the most widely used programs for detecting positive selection, at the molecular level, is the program

Indexed as

Biological EvolutionSoftwareCodonEvolution, MolecularPhylogenyCodonComparative genomicsGenome analysisMolecular evolutionPositive selectionProtein sequence analysisPython

Identifiers

PMID33093185
PMCPMC7718741

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.