Evidence mapPaperPMID 33134697Full record

ArticleACS omega2020

Quantitative Structure-Activity Relationship Machine Learning Models and their Applications for Identifying Viral 3CLpro- and RdRp-Targeting Compounds as Potential Therapeutics for COVID-19 and Related Viral Infections.

Julian Ivanov, Dmitrii Polshakov, Junko Kato-Weinstein, Qiongqiong Zhou, Yingzhu Li, Roger Granet, Linda Garner, Yi Deng, Cynthia Liu, Dana Albaiu and 2 more

Abstract read
In one paragraph

Article in ACS omega, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Trial
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  12. Microorganisms · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Julian IvanovCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Dmitrii PolshakovCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Junko Kato-WeinsteinCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Qiongqiong ZhouCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Yingzhu LiCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Roger GranetCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Linda GarnerCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Yi DengCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Cynthia LiuCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Dana AlbaiuCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Jeffrey WilsonCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.
Christopher AultmanCAS, A Division of the American Chemical Society, Columbus, Ohio 43210-3012, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In response to the ongoing COVID-19 pandemic, there is a worldwide effort being made to identify potential anti-SARS-CoV-2 therapeutics. Here, we contribute to these efforts by building machine-learning predictive models to identify novel drug candidates for the viral targets 3 chymotrypsin-like protease (3CLpro) and RNA-dependent RNA polymerase (RdRp). Chemist-curated training sets of substances were assembled from CAS data collections and integrated with curated bioassay data. The best-performing classification models were applied to screen a set of FDA-approved drugs and CAS REGISTRY substances that are similar to, or associated with, antiviral agents. Numerous substances with potential activity against 3CLpro or RdRp were found, and some were validated by published bioassay studies and/or by their inclusion in upcoming or ongoing COVID-19 clinical trials. This study further supports that machine learning-based predictive models may be used to assist the drug discovery process for COVID-19 and other diseases.

Identifiers

PMID33134697
PMCPMC7571315

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.