ArticlemSphere2020
Sediment Metagenomes as Time Capsules of Lake Microbiomes.
Article in mSphere, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
12 citing papers in PubMed.
- DNA virus-host patterns in lake and marine environments over the last glacial cycle.The ISME journal · 2026Article
- Vertical stratification and functional coupling of antibiotic resistance and carbon metabolism in thermokarst lake sediments.ISME communications · 2026Article
- Agricultural land use shapes short and long‑term bacterial diversity, community structure, and assembly in biofilms of adjacent streams.Environmental microbiome · 2025Article
- Temporal succession of bacterial and archaeal communities in a Mediterranean high-mountain lake over the last 430 years using sedimentary DNA.Microbial ecology · 2025Article
- Postglacial bioweathering, soil nutrient cycling, and podzolization from palaeometagenomics of plants, fungi, and bacteria.Science advances · 2025Article
- Large scale exploration reveals rare taxa crucially shape microbial assembly in alkaline lake sediments.NPJ biofilms and microbiomes · 2024Article
- A genome catalogue of lake bacterial diversity and its drivers at continental scale.Nature microbiology · 2023Article
- Compositional Changes in Sediment Microbiota Are Associated with Seasonal Variation of the Water Column in High-Altitude Hyperarid Andean Lake Systems.Microbiology spectrum · 2023Article
- Red mark syndrome: Is the aquaculture water microbiome a keystone for understanding the disease aetiology?Frontiers in microbiology · 2023Article
- Lake microbiome and trophy fluctuations of the ancient hemp rettery.Scientific reports · 2022Article
- Environmental paleomicrobiology: using DNA preserved in aquatic sediments to its full potential.Environmental microbiology · 2022Review
- Landscape Setting Drives the Microbial Eukaryotic Community Structure in Four Swedish Mountain Lakes over the Holocene.Microorganisms · 2021Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The reconstruction of ecological time series from lake sediment archives can retrace the environmental impact of human activities. Molecular genetic approaches in paleolimnology have provided unprecedented access to DNA time series, which record evidence of the microbial ecologies that underlaid historical lake ecosystems. Such studies often rely on single-gene surveys, and consequently, the full diversity of preserved microorganisms remains unexplored. In this study, we probed the diversity archived in contemporary and preindustrial sediments by comparative shotgun metagenomic analysis of surface water and sediment samples from three eastern Canadian lakes. In a strategy that was aimed at disentangling historical DNA from the indigenous sediment background, microbial preservation signals were captured by mapping sequence similarities between sediment metagenome reads and reference surface water metagenome assemblies. We detected preserved
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.