Evidence map›Paper›PMID 33188783›Full record

ArticleJournal of molecular biology2020

A Disorder-to-Order Transition Activates an ATP-Independent Membrane Protein Chaperone.

Alex Siegel, Camille Z McAvoy, Vinh Lam, Fu-Cheng Liang, Gerard Kroon, Emily Miaou, Patrick Griffin, Peter E Wright, Shu-Ou Shan

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Alex SiegelDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, United States.
Camille Z McAvoyDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, United States.
Vinh LamDepartment of Molecular Medicine, Florida Campus, The Scripps Research Institute, Jupiter, FL 33458, United States.
Fu-Cheng LiangDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, United States.
Gerard KroonDepartment of Integrative Structural and Computational Biology and the Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037, United States.
Emily MiaouDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, United States.
Patrick GriffinDepartment of Molecular Medicine, Florida Campus, The Scripps Research Institute, Jupiter, FL 33458, United States.
Peter E WrightDepartment of Integrative Structural and Computational Biology and the Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037, United States.
Shu-Ou ShanDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, United States. Electronic address: sshan@caltech.edu.
California Institute of Technology · USScripps Research Institute · US

Funding

PREDOCTORAL TRAINING IN BIOLOGY AND CHEMISTRYT32GM007616 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STERNBERG, PAUL WARREN · 1985 to 2019
$22.9M
Supplement: Accurate Molecular Decision Making during Protein BiogenesisR35GM136321 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI Shu-ou Shan · 2020 to 2026
$6.7M
Understanding Molecular Chaperones during Membrane Protein BiogenesisR01GM114390 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI SHAN, SHU-OU · 2016 to 2019
$1.4M
NIGMS NIH HHS R01 GM114390NIGMS NIH HHS R35 GM136321NIGMS NIH HHS T32 GM007616
6 · The paper itself

Abstract

The 43 kDa subunit of the chloroplast signal recognition particle, cpSRP43, is an ATP-independent chaperone essential for the biogenesis of the light harvesting chlorophyll-binding proteins (LHCP), the most abundant membrane protein family on earth. cpSRP43 is activated by a stromal factor, cpSRP54, to more effectively capture and solubilize LHCPs. The molecular mechanism underlying this chaperone activation is unclear. Here, a combination of hydrogen-deuterium exchange, electron paramagnetic resonance, and NMR spectroscopy experiments reveal that a disorder-to-order transition of the ankyrin repeat motifs in the substrate binding domain of cpSRP43 drives its activation. An analogous coil-to-helix transition in the bridging helix, which connects the ankyrin repeat motifs to the cpSRP54 binding site in the second chromodomain, mediates long-range allosteric communication of cpSRP43 with its activating binding partner. Our results provide a molecular model to explain how the conformational dynamics of cpSRP43 enables regulation of its chaperone activity and suggest a general mechanism by which ATP-independent chaperones with cooperatively folding domains can be regulated.

Indexed as

Adenosine TriphosphateAmino Acid SequenceArabidopsisArabidopsis ProteinsBinding SitesChloroplastsLight-Harvesting Protein ComplexesMembrane ProteinsModels, MolecularMolecular ChaperonesProtein BindingProtein ConformationProtein FoldingSignal Recognition ParticleAdenosine TriphosphateArabidopsis ProteinscpSRP43 protein, ArabidopsisLight-Harvesting Protein ComplexesMembrane ProteinsMolecular ChaperonesSignal Recognition Particleankyrin repeat proteinschaperonemembrane protein biogenesisNMR spectroscopyprotein dynamics

Identifiers

PMID33188783
PMCPMC7780713
OpenAlexW3102449454

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.