Evidence map›Paper›PMID 33199048›Full record

ReviewTrends in genetics : TIG2021

Hotspots of Human Mutation.

Alex V Nesta, Denisse Tafur, Christine R Beck

Open access · bronzeAbstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 2 pooled it
4.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 2 syntheses or guidelines pooled it, 123 citations in OpenAlex.

  1. Pooled it
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  15. Nucleotide Substitution Biases in Related Cancer Driver Genes.International journal of molecular sciences · 2025
    Article
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  17. Article
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  20. The long and short of hyperdivergent regions.Trends in genetics : TIG · 2025
    Review

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Alex V NestaDepartment of Genetics and Genome Sciences, University of Connecticut Health Center, Farmington, CT 06030, USA; The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
Denisse TafurThe Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
Christine R BeckDepartment of Genetics and Genome Sciences, University of Connecticut Health Center, Farmington, CT 06030, USA; The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA; Institute for Systems Genomics, University of Connecticut Health Center, Farmington, CT 06030, USA. Electronic address: christine.beck@jax.org.
Jackson Laboratory · USUConn Health · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI Paul Robson · 1985 to 2026
$61.9M
Repetitive sequences drive genome variation and plasticityR35GM133600 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI Christine R Beck · 2019 to 2026
$3.0M
Mechanisms of Repetitive Element Mediated Genomic RearrangementsR00GM120453 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI BECK, CHRISTINE R · 2018 to 2019
$498k
NCI NIH HHS P30 CA034196NIGMS NIH HHS R00 GM120453NIGMS NIH HHS R35 GM133600
6 · The paper itself

Abstract

Mutation of the human genome results in three classes of genomic variation: single nucleotide variants; short insertions or deletions; and large structural variants (SVs). Some mutations occur during normal processes, such as meiotic recombination or B cell development, and others result from DNA replication or aberrant repair of breaks in sequence-specific contexts. Regardless of mechanism, mutations are subject to selection, and some hotspots can manifest in disease. Here, we discuss genomic regions prone to mutation, mechanisms contributing to mutation susceptibility, and the processes leading to their accumulation in normal and somatic genomes. With further, more accurate human genome sequencing, additional mutation hotspots, mechanistic details of their formation, and the relevance of hotspots to evolution and disease are likely to be discovered.

Indexed as

GenomicsDNA ReplicationGenome, HumanGenomic Structural VariationHumansMutationPolymorphism, Single NucleotideRecombination, GeneticDNA repairindelmutation hotspotsrecurrent mutationselectionstructural variation

Identifiers

PMID33199048
PMCPMC8366565
OpenAlexW3103040926

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.