Evidence map›Paper›PMID 33213387›Full record

ArticleBMC genomics2020

Targeted mutagenesis of ∆5 and ∆6 fatty acyl desaturases induce dysregulation of lipid metabolism in Atlantic salmon (Salmo salar).

Yang Jin, Alex K Datsomor, Rolf E Olsen, Jon Olav Vik, Jacob S Torgersen, Rolf B Edvardsen, Anna Wargelius, Per Winge, Fabian Grammes

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Contribution ofAnimals : an open access journal from MDPI · 2024
    Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Yang JinDepartment of Animal and Aquacultural Sciences, Norwegian University of Life Sciences, N-1432, Aas, Norway.
Alex K DatsomorDepartment of Biology, Norwegian University of Science and Technology, N-7491, Trondheim, Norway.
Rolf E OlsenDepartment of Biology, Norwegian University of Science and Technology, N-7491, Trondheim, Norway.
Jon Olav VikFaculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, N-1432, Aas, Norway.
Jacob S TorgersenAquaGen AS, Post box 1240, Torgard, N-7462, Trondheim, Norway.
Rolf B EdvardsenInstitute of Marine Research, N-5817, Bergen, Norway.
Anna WargeliusInstitute of Marine Research, N-5817, Bergen, Norway.
Per WingeDepartment of Biology, Norwegian University of Science and Technology, N-7491, Trondheim, Norway.
Fabian GrammesDepartment of Animal and Aquacultural Sciences, Norwegian University of Life Sciences, N-1432, Aas, Norway. fabian.grammes@aquagen.no.ORCID http://orcid.org/0000-0002-9551-9280
Norwegian University of Science and Technology · NOAquaGen (Norway) · NONorwegian Institute of Marine Research · NONorwegian University of Life Sciences · NO

Funding

Norges Forskningsråd DigiSal, grant number 248792
6 · The paper itself

Abstract

backgroundWith declining wild fish populations, farmed salmon has gained popularity as a source for healthy long-chain highly unsaturated fatty acids (LC-HUFA). However, the introduction of plant oil in farmed salmon feeds has reduced the content of these beneficial LC-HUFA. The synthetic capability for LC-HUFAs depends upon the dietary precursor fatty acids and the genetic potential, thus there is a need for in-depth understanding of LC-HUFA synthetic genes and their interactions with other genes involved in lipid metabolism. Several key genes of LC-HUFA synthesis in salmon belong to the fatty acid desaturases 2 (fads2) family. The present study applied whole transcriptome analysis on two CRISPR-mutated salmon strains (crispants), 1) Δ6abc/5

resultsBoth Δ6abc/5

conclusionsCRISPR-Cas9 can efficiently mutate multiple fads2 genes simultaneously in salmon. The results of the present study have provided new information on the transcriptional regulations of lipid metabolism genes after reduction of LC-HUFA synthesis pathways in salmon.

Indexed as

Salmo salarAnimalsFatty AcidsHumansLipid MetabolismLipogenesisLiverMutagenesisFatty AcidsAtlantic salmonCRISPR mosaicismFatty acid desaturaseLong-chain highly unsaturated fatty acidsSterol regulatory binding protein, exon skippingTranscriptional regulation

Identifiers

PMID33213387
PMCPMC7678299
OpenAlexW3104723253

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.