Evidence map›Paper›PMID 33277490›Full record

ArticleNature communications2020

Arabidopsis calcium-dependent protein kinase 3 regulates actin cytoskeleton organization and immunity.

Yi-Ju Lu, Pai Li, Masaki Shimono, Alex Corrion, Takumi Higaki, Sheng Yang He, Brad Day

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 68 citations in OpenAlex.

  1. Review
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  9. With or without a CaPlanta · 2025
    Article
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  12. Article
  13. Article
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  15. Review
  16. Morphometric analysis of actin networks.Molecular biology of the cell · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. A CaHorticulture research · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Yi-Ju LuDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA.
Pai LiDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA.
Masaki ShimonoDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA.
Alex CorrionDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA.
Takumi HigakiInternational Research Organization for Advanced Science and Technology (IROAST), Kumamoto University, Kumamoto, 860-8555, Japan.
Sheng Yang HeDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA.
Brad DayDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA. bday@msu.edu.ORCID 0000-0002-9880-4319
Michigan State University · USKumamoto University · JPMichigan Department of Agriculture and Rural Development · US

Funding

Nucleocytoplasmic regulation of pathogen-induced actin dynamics.R01GM125743 · NIGMS · MICHIGAN STATE UNIVERSITY · PI DAY, ROBERT BRADLEY · 2018 to 2021
$1.2M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM125743
6 · The paper itself

Abstract

Pattern-triggered immunity and effector-triggered immunity are two primary forms of innate immunity in land plants. The molecular components and connecting nodes of pattern-triggered immunity and effector-triggered immunity are not fully understood. Here, we report that the Arabidopsis calcium-dependent protein kinase CPK3 is a key regulator of both pattern-triggered immunity and effector-triggered immunity. In vitro and in vivo phosphorylation assays, coupled with genetic and cell biology-based analyses, show that actin-depolymerization factor 4 (ADF4) is a physiological substrate of CPK3, and that phosphorylation of ADF4 by CPK3 governs actin cytoskeletal organization associated with pattern-triggered immunity. CPK3 regulates stomatal closure induced by flg22 and is required for resistance to Pst DC3000. Our data further demonstrates that CPK3 is required for resistance to Pst DC3000 carrying the effector AvrPphB. These results suggest that CPK3 is a missing link between cytoskeleton organization, pattern-triggered immunity and effector-triggered immunity.

Indexed as

Actin CytoskeletonActin Depolymerizing FactorsAmino Acid SequenceArabidopsisArabidopsis ProteinsCalcium-Calmodulin-Dependent Protein KinasesMicroscopy, ConfocalMutationPlant DiseasesPlant ImmunityPlants, Genetically ModifiedPseudomonas syringaeSequence Homology, Amino AcidActin Depolymerizing FactorsADF4 protein, ArabidopsisArabidopsis ProteinsCalcium-Calmodulin-Dependent Protein KinasesCPK3 protein, Arabidopsis

Identifiers

PMID33277490
PMCPMC7718926
OpenAlexW3110127061

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.