Evidence map›Paper›PMID 33329546›Full record

ArticleFrontiers in immunology2020

Preparing for Life: Plasma Proteome Changes and Immune System Development During the First Week of Human Life.

Tue Bjerg Bennike, Benoit Fatou, Asimenia Angelidou, Joann Diray-Arce, Reza Falsafi, Rebecca Ford, Erin E Gill, Simon D van Haren, Olubukola T Idoko, Amy H Lee and 13 more

Registry-linked trialOpen access · goldAbstract readMulticenter Study
In one paragraph

Article in Frontiers in immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05730569 (Description and Comparison of Biological Vulnerability in Small Vulnerable Newborns Versus Healthy Community Controls in Urban Burkina Faso), which is not on this map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05730569 unknown statusnot on this mapstarted 2023, after this paper: background citation

Description and Comparison of Biological Vulnerability in Small Vulnerable Newborns Versus Healthy Community Controls in Urban Burkina Faso (DenBalo): Gut Microbiota, Immune System, and Breastmilk Assembly and Development in the First Days and Weeks of Life

TypeobservationalSponsorUniversity GhentRan2023 to 2024Enrolled140ConditionsPreterm Birth, Low Birth Weight, Small for Gestational Age at Delivery
3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 11 institutions in 7 countries.

Tue Bjerg BennikeDepartment of Pathology, Boston Children's Hospital, Boston, MA, United States.
Benoit FatouDepartment of Pathology, Boston Children's Hospital, Boston, MA, United States.
Asimenia AngelidouPrecision Vaccines Program, Boston Children's Hospital, Boston, MA, United States.
Joann Diray-ArcePrecision Vaccines Program, Boston Children's Hospital, Boston, MA, United States.
Reza FalsafiDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, BC, Canada.
Rebecca FordPapua New Guinea Institute of Medical Research, Goroka, Papua New Guinea.
Erin E GillDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, BC, Canada.
Simon D van HarenPrecision Vaccines Program, Boston Children's Hospital, Boston, MA, United States.
Olubukola T IdokoVaccines and Immunity Theme, Medical Research Council Unit, The Gambia at the London School of Hygiene and Tropical Medicine, Banjul, Gambia.
Amy H LeeDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, BC, Canada.
Rym Ben-OthmanDepartment of Pediatrics, University of British Columbia, and BC Children's Hospital, Vancouver, BC, Canada.
William S PomatPapua New Guinea Institute of Medical Research, Goroka, Papua New Guinea.
Casey P ShannonPROOF Centre of Excellence, Vancouver, BC, Canada.
Kinga K SmolenPrecision Vaccines Program, Boston Children's Hospital, Boston, MA, United States.
Scott J TebbuttPROOF Centre of Excellence, Vancouver, BC, Canada.
Al OzonoffPrecision Vaccines Program, Boston Children's Hospital, Boston, MA, United States.
Peter C RichmondTelethon Kids Institute, Perth, WA, Australia.
Anita H J van den BiggelaarTelethon Kids Institute, Perth, WA, Australia.
Robert E W HancockDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, BC, Canada.
Beate KampmannVaccines and Immunity Theme, Medical Research Council Unit, The Gambia at the London School of Hygiene and Tropical Medicine, Banjul, Gambia.
Tobias R KollmannDepartment of Pediatrics, University of British Columbia, and BC Children's Hospital, Vancouver, BC, Canada.
Ofer LevyPrecision Vaccines Program, Boston Children's Hospital, Boston, MA, United States.
Hanno SteenDepartment of Pathology, Boston Children's Hospital, Boston, MA, United States.
Harvard University · USUniversity of British Columbia · CABoston Children's Hospital · USMRC Unit the Gambia · GMPapua New Guinea Institute of Medical Research · PGThe Kids Research Institute Australia · AUAalborg University · DKBeth Israel Deaconess Medical Center · USPrevention of Organ Failure · CASimon Fraser University · CASt. Paul's Hospital · CA

Funding

Transcriptomics to define biomarkers of neonatal vaccine immunogenicityU19AI118608 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI OZONOFF, AL · 2017 to 2021
$24.7M
Dissecting the mechanism of age-specific adjuvant synergy in vitro and in vivoU01AI124284 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI LEVY, OFER · 2016 to 2020
$2.9M
Medical Research Council MC_UP_A900/1122Medical Research Council MC_UP_A900/115Medical Research Council MR/R005990/1Medical Research Council MR/R005990/2NIAID NIH HHS HHSN272201400052CNIAID NIH HHS U01 AI124284NIAID NIH HHS U19 AI118608
6 · The paper itself

Abstract

Neonates have heightened susceptibility to infections. The biological mechanisms are incompletely understood but thought to be related to age-specific adaptations in immunity due to resource constraints during immune system development and growth. We present here an extended analysis of our proteomics study of peripheral blood-plasma from a study of healthy full-term newborns delivered vaginally, collected at the day of birth and on day of life (DOL) 1, 3, or 7, to cover the first week of life. The plasma proteome was characterized by LC-MS using our established 96-well plate format plasma proteomics platform. We found increasing acute phase proteins and a reduction of respective inhibitors on DOL1. Focusing on the complement system, we found increased plasma concentrations of all major components of the classical complement pathway and the membrane attack complex (MAC) from birth onward, except C7 which seems to have near adult levels at birth. In contrast, components of the lectin and alternative complement pathways mainly decreased. A comparison to whole blood messenger RNA (mRNA) levels enabled characterization of mRNA and protein levels in parallel, and for 23 of the 30 monitored complement proteins, the whole blood transcript information by itself was not reflective of the plasma protein levels or dynamics during the first week of life. Analysis of immunoglobulin (Ig) mRNA and protein levels revealed that IgM levels and synthesis increased, while the plasma concentrations of maternally transferred IgG1-4 decreased in accordance with their

Indexed as

Child DevelopmentImmunity, InnateProteomeAcute-Phase ProteinsAge FactorsComplement System ProteinsHumansImmune SystemImmunoglobulinsInfant, NewbornProof of Concept StudyProtein Interaction MapsProteomicsRNA, MessengerAcute-Phase ProteinsComplement System ProteinsImmunoglobulinsProteomeRNA, Messengercomplementimmunoglobulininhibitorsinnate immune systemmembrane attack complex (MAC)ontogenyproteomicsterminal complement complex (SC5b-9)

Identifiers

PMID33329546
PMCPMC7732455
OpenAlexW3094555446

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.