Evidence map›Paper›PMID 33330468›Full record

ArticleFrontiers in cell and developmental biology2020

Analyses of Avascular Mutants Reveal Unique Transcriptomic Signature of Non-conventional Endothelial Cells.

Boryeong Pak, Christopher E Schmitt, Woosoung Choi, Jun-Dae Kim, Orjin Han, Jessica Alsiö, Da-Woon Jung, Darren R Williams, Wouter Coppieters, Didier Y R Stainier and 1 more

Abstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The Role of BMP Signaling in Endothelial Heterogeneity.Frontiers in cell and developmental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Boryeong PakSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, South Korea.
Christopher E SchmittCurriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Woosoung ChoiSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, South Korea.
Jun-Dae KimYale Cardiovascular Research Center and Section of Cardiovascular Medicine, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, United States.
Orjin HanSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, South Korea.
Jessica AlsiöCurriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Da-Woon JungSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, South Korea.
Darren R WilliamsSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, South Korea.
Wouter CoppietersUnit of Animal Genomics, Faculty of Veterinary Medicine, Interdisciplinary Institute of Applied Genomics (GIGA-R), University of Liège (B34), Liège, Belgium.
Didier Y R StainierDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.
Suk-Won JinSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, South Korea.

Funding

Bone Morphogenic Protein Signaling in Lymphatic Endothelial CellsR01HL114820 · NHLBI · YALE UNIVERSITY · PI JIN, SUK-WON · 2013 to 2016
$1.8M
NHLBI NIH HHS R01 HL114820
6 · The paper itself

Abstract

Endothelial cells appear to emerge from diverse progenitors. However, to which extent their developmental origin contributes to define their cellular and molecular characteristics remains largely unknown. Here, we report that a subset of endothelial cells that emerge from the tailbud possess unique molecular characteristics that set them apart from stereotypical lateral plate mesoderm (LPM)-derived endothelial cells. Lineage tracing shows that these tailbud-derived endothelial cells arise at mid-somitogenesis stages, and surprisingly do not require Npas4l or Etsrp function, indicating that they have distinct spatiotemporal origins and are regulated by distinct molecular mechanisms. Microarray and single cell RNA-seq analyses reveal that somitogenesis- and neurogenesis-associated transcripts are over-represented in these tailbud-derived endothelial cells, suggesting that they possess a unique transcriptomic signature. Taken together, our results further reveal the diversity of endothelial cells with respect to their developmental origin and molecular properties, and provide compelling evidence that the molecular characteristics of endothelial cells may reflect their distinct developmental history.

Indexed as

endotheliumfate mappingtailbudtranscriptomicszebrafish

Identifiers

PMID33330468
PMCPMC7719722

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.