Evidence map›Paper›PMID 33333074›Full record

ArticleBiochemical pharmacology2021

Characterization of human pregnane X receptor activators identified from a screening of the Tox21 compound library.

Caitlin Lynch, Srilatha Sakamuru, Ruili Huang, Jake Niebler, Stephen S Ferguson, Menghang Xia

Open access · hybridAbstract read
In one paragraph

Article in Biochemical pharmacology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Applicability domain-expansion studies for machine learning models reveal new inhibitors of CYP2B6.Drug metabolism and disposition: the biological fate of chemicals · 2025
    Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Protective Effect ofNutrients · 2022
    Article
  10. Pregnane X Receptor and the Gut-Liver Axis: A Recent Update.Drug metabolism and disposition: the biological fate of chemicals · 2022
    Review
  11. Review
  12. Review
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Caitlin LynchNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, United States.
Srilatha SakamuruNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, United States.
Ruili HuangNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, United States.
Jake NieblerNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, United States.
Stephen S FergusonDivision of the National Toxicology Program, National Institute of Environmental Health Sciences, NIH, Durham, NC, United States.
Menghang XiaNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, United States. Electronic address: mxia@mail.nih.gov.
National Institutes of Health · USNational Center for Advancing Translational Sciences · USNational Institute of Environmental Health Sciences · US

Funding

Toxicology in the 21st Century Program (Tox21) - Systems ToxicologyZIATR000038 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI XIA, MENGHANG · 2015 to 2025
$5.7M
Toxicology in the 21st Century Program (Tox21) - Computational ToxicologyZIATR000040 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI HUANG, RUILI · 2016 to 2025
$3.5M
Intramural NIH HHS Z99 TR999999Intramural NIH HHS ZIA TR000038
6 · The paper itself

Abstract

The pregnane X receptor (PXR; NR1I2) is an important nuclear receptor whose main function is to regulate enzymes within drug metabolism. The main drug metabolizing enzyme regulated by PXR, cytochrome P450 (CYP) 3A4, accounts for the metabolism of nearly 50% of all marketed drugs. Recently, PXR has also been identified as playing a role in energy homeostasis, immune response, and cancer. Due to its interaction with these important roles, alongside its drug-drug interaction function, it is imperative to identify compounds which can modulate PXR. In this study, we screened the Tox21 10,000 compound collection to identify hPXR agonists using a stable hPXR-Luc HepG2 cell line. A pharmacological study in the presence of a PXR antagonist was performed to confirm the activity of the chosen potential hPXR agonists in the same cells. Finally, metabolically competent cell lines - HepaRG and HepaRG-PXR-Knockout (KO) - were used to further confirm the potential PXR activators. We identified a group of structural clusters and singleton compounds which included potentially novel hPXR agonists. Of the 21 selected compounds, 11 potential PXR activators significantly induced CYP3A4 mRNA expression in HepaRG cells. All of these compounds lost their induction when treating HepaRG-PXR-KO cells, confirming their PXR activation. Etomidoline presented as a potentially selective agonist of PXR. In conclusion, the current study has identified 11 compounds as potentially novel or not well-characterized PXR activators. These compounds should further be studied for their potential effects on drug metabolism and drug-drug interactions due to the immense implications of being a PXR agonist.

Indexed as

Cytochrome P-450 CYP3ACytochrome P-450 CYP3A InducersGene Knockout TechniquesHEK293 CellsHep G2 CellsHigh-Throughput Screening AssaysHumansPregnane X ReceptorReproducibility of ResultsSmall Molecule LibrariesCYP3A4 protein, humanCytochrome P-450 CYP3ACytochrome P-450 CYP3A InducersNR1I2 protein, humanPregnane X ReceptorSmall Molecule LibrariesAgonistPregnane X receptorQuantitative high-throughput screeningTox21

Identifiers

PMID33333074
PMCPMC9440615
OpenAlexW3112644702

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.