Evidence map›Paper›PMID 33378640›Full record

ArticleStructure (London, England : 1993)2021

Structural analysis of Mycobacterium tuberculosis M13 metalloprotease Zmp1 open states.

Wenguang G Liang, Jordan M Mancl, Minglei Zhao, Wei-Jen Tang

Open access · greenAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Host range expansion ofFrontiers in microbiology · 2025
    Article
  4. Article
  5. Antimicrobial Resistance and Comparative Genomic Analysis ofAntibiotics (Basel, Switzerland) · 2022
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Wenguang G LiangBen May Department for Cancer Research, The University of Chicago, Chicago, IL 60637, USA.
Jordan M ManclBen May Department for Cancer Research, The University of Chicago, Chicago, IL 60637, USA.
Minglei ZhaoDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL 60637, USA. Electronic address: mlzhao@uchicago.edu.
Wei-Jen TangBen May Department for Cancer Research, The University of Chicago, Chicago, IL 60637, USA. Electronic address: wtang@uchicago.edu.
University of Chicago · US

Funding

Time resolved SAXS studies on the RP2/Arl3 complex pp.484-485P41GM103622 · NIGMS · ILLINOIS INSTITUTE OF TECHNOLOGY · PI IRVING, THOMAS C · 2012 to 2020
$11.9M
Structure-function analysis and small molecule modulator discovery of human insulin degrading enzymeR01GM121964 · NIGMS · UNIVERSITY OF CHICAGO · PI TANG, WEI-JEN · 2017 to 2024
$3.1M
NIGMS NIH HHS P41 GM103622NIGMS NIH HHS R01 GM121964
6 · The paper itself

Abstract

Zinc metalloprotease 1 (Zmp1), a Mycobacterium tuberculosis 75 kDa secreted enzyme, mediates key stages of tuberculosis disease progression. The biological activity of Zmp1 presumably stems from its ability to degrade bacterium- and/or host-derived peptides. The crystal structures of Zmp1 and related M13 metalloproteases, such as neprilysin and endothelin-converting enzyme-1 were determined only in the closed conformation, which cannot capture substrates or release proteolytic products. Thus, the mechanisms of substrate binding and selectivity remain elusive. Here we report two open-state cryo-EM structures of Zmp1, revealed by our SAXS analysis to be the dominant states in solution. Our structural analyses reveal how ligand binding induces a conformational switch in four linker regions to drive the rigid body motion of the D1 and D2 domains, which form the sizable catalytic chamber. Furthermore, they offer insights into the catalytic cycle and mechanism of substrate recognition of M13 metalloproteases for future therapeutic innovations.

Indexed as

Bacterial ProteinsCryoelectron MicroscopyLigandsMetalloproteasesModels, MolecularMycobacterium tuberculosisProtein BindingProtein ConformationProtein DomainsScattering, Small AngleX-Ray DiffractionBacterial ProteinsLigandsMetalloproteasesZmp1 protein, Mycobacterium tuberculosisconformational switchcryo-EMM13 metalloproteaseMycobacterium tuberculosisSAXSsubstrate recognitionZmp1

Identifiers

PMID33378640
PMCPMC8691456
OpenAlexW3116503856

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.