Evidence map›Paper›PMID 33389447›Full record

ArticleJournal of assisted reproduction and genetics2021

Deregulation of imprinted genes expression and epigenetic regulators in placental tissue from intrauterine growth restriction.

Carla Caniçais, Sara Vasconcelos, Carla Ramalho, C Joana Marques, Sofia Dória

Open access · greenAbstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

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  15. [Correlation ofZhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Carla CaniçaisDepartment of Genetics, Faculty of Medicine, University of Porto, 4200-319, Porto, Portugal.
Sara VasconcelosDepartment of Genetics, Faculty of Medicine, University of Porto, 4200-319, Porto, Portugal.
Carla Ramalhoi3S-Instituto de Investigação e Inovação em Saúde, Porto, Portugal.ORCID https://orcid.org/0000-0002-3977-3946
C Joana MarquesDepartment of Genetics, Faculty of Medicine, University of Porto, 4200-319, Porto, Portugal. cmarques@med.up.pt.
Sofia DóriaDepartment of Genetics, Faculty of Medicine, University of Porto, 4200-319, Porto, Portugal. sdoria@med.up.pt.ORCID https://orcid.org/0000-0001-9225-9076
Universidade do Porto · PTHospital de São João · PT

Funding

Fundação para a Ciência e a Tecnologia SFRH/BD/147440/2019Fundação para a Ciência e a Tecnologia UID/BIM/04293/2013Fundação para a Ciência e a Tecnologia (PT) SFRH/BD/141855/2018
6 · The paper itself

Abstract

purposeIntrauterine growth restriction (IUGR) is a fetal growth complication that can be caused by ineffective nutrient transfer from the mother to the fetus via the placenta. Abnormal placental development and function have been correlated with abnormal expression of imprinted genes, which are regulated by epigenetic modifications at imprinting control regions (ICRs). In this study, we analyzed the expression of imprinted genes known to be involved in fetal growth and epigenetic regulators involved in DNA methylation, as well as DNA methylation at the KvDMR1 imprinting control region and global levels of DNA hydroxymethylation, in IUGR cases.

methodsExpression levels of imprinted genes and epigenetic regulators were analyzed in term placental samples from 21 IUGR cases and 9 non-IUGR (control) samples, by RT-qPCR. Additionally, KvDMR1 methylation was analyzed by bisulfite sequencing and combined bisulfite restriction analysis (COBRA) techniques. Moreover, global DNA methylation and hydroxymethylation levels were also measured.

resultsWe observed increased expression of PHLDA2, CDKN1C, and PEG10 imprinted genes and of DNMT1, DNMT3A, DNMT3B, and TET3 epigenetic regulators in IUGR placentas. No differences in methylation levels at the KvDMR1 were observed between the IUGR and control groups; similarly, no differences in global DNA methylation and hydromethylation were detected.

conclusionOur study shows that deregulation of epigenetic mechanisms, namely increased expression of imprinted genes and epigenetic regulators, might be associated with IUGR etiology. Therefore, this study adds knowledge to the molecular mechanisms underlying IUGR, which may contribute to novel prediction tools and future therapeutic options for the management of IUGR pregnancies.

Indexed as

Apoptosis Regulatory ProteinsCyclin-Dependent Kinase Inhibitor p57DioxygenasesDNA-Binding ProteinsDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3ADNA Methyltransferase 3BEpigenesis, GeneticFemaleFetal DevelopmentFetal Growth RetardationGene Expression Regulation, DevelopmentalGenomic ImprintingHumansApoptosis Regulatory ProteinsCDKN1C protein, humanCyclin-Dependent Kinase Inhibitor p57DioxygenasesDNA-Binding ProteinsDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADNA Methyltransferase 3BDNMT1 protein, humanDNMT3A protein, humanNuclear ProteinsPEG10 protein, humanRNA-Binding ProteinsTET3 protein, humanTSSC3 proteinDNA hydroxymethylationDNA methylationGenomic imprintingIntrauterine growth restrictionPlacenta

Identifiers

PMID33389447
PMCPMC8079450
OpenAlexW3120927876

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.