Evidence map›Paper›PMID 33446573›Full record

ArticleGenes & development2021

Esc2 orchestrates substrate-specific sumoylation by acting as a SUMO E2 cofactor in genome maintenance.

Shibai Li, Jacob N Bonner, Bingbing Wan, Stephen So, Ashley Mutchler, Leticia Gonzalez, Xiaoyu Xue, Xiaolan Zhao

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Multifaceted roles of SUMO in DNA metabolism.Nucleus (Austin, Tex.) · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Advances in SUMO-based regulation of homologous recombination.Current opinion in genetics & development · 2021
    Review
  11. Integrative analysis reveals unique structural and functional features of the Smc5/6 complex.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Shibai Li *Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
Jacob N Bonner *Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
Bingbing WanMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
Stephen SoDepartment of Chemistry and Biochemistry, Texas State University, San Marcos, Texas 78666, USA.
Ashley MutchlerMaterials Science, Engineering, and Commercialization Program, Texas State University, San Marcos, Texas 78666, USA.
Leticia GonzalezDepartment of Chemistry and Biochemistry, Texas State University, San Marcos, Texas 78666, USA.
Xiaoyu XueDepartment of Chemistry and Biochemistry, Texas State University, San Marcos, Texas 78666, USA.
Xiaolan ZhaoMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.ORCID 0000-0002-8302-6905
Memorial Sloan Kettering Cancer Center · USTexas State University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
The Rtt107 interactome structures and functionsR01GM080670 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI ZHAO, XIAOLAN · 2007 to 2021
$4.5M
Regulation of Replication and Recombination IntermediatesR01GM131058 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI ZHAO, XIAOLAN · 2019 to 2022
$1.6M
Roles of the human UAP56 helicase in co-transcriptional R-loop resolution and genome maintenanceR15GM139135 · NIGMS · TEXAS STATE UNIVERSITY · PI XUE, XIAOYU · 2020 to 2020
$436k
Functions of the DNA/RNA motor protein AQR in R-loop resolutionR21ES028792 · NIEHS · YALE UNIVERSITY · PI XUE, XIAOYU · 2018 to 2019
$424k
NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA054174NIEHS NIH HHS R21 ES028792NIGMS NIH HHS R01 GM080670NIGMS NIH HHS R01 GM131058NIGMS NIH HHS R15 GM139135
6 · The paper itself

Abstract

SUMO modification regulates diverse cellular processes by targeting hundreds of proteins. However, the limited number of sumoylation enzymes raises the question of how such a large number of substrates are efficiently modified. Specifically, how genome maintenance factors are dynamically sumoylated at DNA replication and repair sites to modulate their functions is poorly understood. Here, we demonstrate a role for the conserved yeast Esc2 protein in this process by acting as a SUMO E2 cofactor. Esc2 is required for genome stability and binds to Holliday junctions and replication fork structures. Our targeted screen found that Esc2 promotes the sumoylation of a Holliday junction dissolution complex and specific replisome proteins. Esc2 does not elicit these effects via stable interactions with substrates or their common SUMO E3. Rather, we show that a SUMO-like domain of Esc2 stimulates sumoylation by exploiting a noncovalent SUMO binding site on the E2 enzyme. This role of Esc2 in sumoylation is required for Holliday junction clearance and genome stability. Our findings thus suggest that Esc2 acts as a SUMO E2 cofactor at distinct DNA structures to promote the sumoylation of specific substrates and genome maintenance.

Indexed as

Cell Cycle ProteinsCoenzymesGenome, FungalGenomic InstabilityProtein BindingRecombination, GeneticSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSumoylationUbiquitin-Conjugating EnzymesUbiquitin-Conjugating Enzyme UBC9Cell Cycle ProteinsCoenzymesEsc2 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSLD2 protein, S cerevisiaeTOP3 protein, S cerevisiaeUbiquitin-Conjugating EnzymesUbiquitin-Conjugating Enzyme UBC9Esc2genome maintenancehomologous recombinationSUMO E2

Identifiers

PMID33446573
PMCPMC7849368
OpenAlexW3121772566

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.