Evidence map›Paper›PMID 33452914›Full record

SynthesisHuman genetics2021

Meta-analysis of sample-level dbGaP data reveals novel shared genetic link between body height and Crohn's disease.

Antonio Di Narzo, Itziar Frades, Heidi M Crane, Paul K Crane, Jean-Sebastian Hulot, Andrew Kasarskis, Amy Hart, Carmen Argmann, Marla Dubinsky, Inga Peter and 1 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Human genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Antonio Di NarzoDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 1425 Madison Ave, New York, NY, 10029, USA.
Itziar FradesDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 1425 Madison Ave, New York, NY, 10029, USA.
Heidi M CraneDepartment of Medicine, University of Washington, Seattle, WA, USA.
Paul K CraneDepartment of Medicine, University of Washington, Seattle, WA, USA.
Jean-Sebastian HulotUniversité de Paris, INSERM, PARCC, CIC1418, F-75015, Paris, France.
Andrew KasarskisDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 1425 Madison Ave, New York, NY, 10029, USA.
Amy HartJanssen R&D, LLC, 1400 McKean Road, Spring House, PA, USA.
Carmen ArgmannDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 1425 Madison Ave, New York, NY, 10029, USA.
Marla DubinskyDepartment of Pediatric Gastroenterology and Nutrition, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Inga PeterDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 1425 Madison Ave, New York, NY, 10029, USA.
Ke HaoDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 1425 Madison Ave, New York, NY, 10029, USA. ke.hao@mssm.edu.ORCID http://orcid.org/0000-0002-1815-9197
Icahn School of Medicine at Mount Sinai · USUniversity of Washington · USBiogipuzkoa Health Research Institute · ESInserm · FRJanssen (United States) · US

Funding

Precision IBD via genetics and genomics: integrating International and multi-omic datasets, expanding studies in diverse populations, and defining mechanisms of unmet clinical needs in IBDU24DK062429 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Ling-shiang Chuang, Ron Do · 2017 to 2026
$13.9M
Substance use patterns and contexts: impact on epigenetic age and prevention strategies in an HIV clinical care cohortR01DA047045 · NIDA · UNIVERSITY OF WASHINGTON · PI Heidi M. Crane, Joseph Austin Delaney · 2018 to 2026
$5.1M
Pharmacogenomics and Systems Pharmacology Approaches to Toxicity, Tolerability, and Comorbidities Associated with Modern Antiretroviral TherapiesR01HG010649 · NHGRI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CRANE, HEIDI M., PETER, INGA · 2019 to 2023
$4.5M
Integrative Genomic Analyses of Macrophages in Crohns DiseaseR01DK106593 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CHO, JUDY H. · 2016 to 2020
$3.8M
Genomic approaches to cardiometabolic risk and treatment in HIVR01HL125027 · NHLBI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CRANE, HEIDI M., PETER, INGA · 2014 to 2017
$2.9M
Placental Functional Networks Linking Developmental Pesticide Exposure and Offspring NeurodevelopmentR01ES029212 · NIEHS · EMORY UNIVERSITY · PI CAUDLE, WILLIAM MICHAEL, CHEN, JIA · 2018 to 2022
$2.7M
Medical Research Council MC_PC_17228Medical Research Council MC_QA137853NHGRI NIH HHS HG010649NHGRI NIH HHS R01 HG010649NHLBI NIH HHS HL125027NHLBI NIH HHS R01 HL125027NIDA NIH HHS DA047045NIDA NIH HHS R01 DA047045NIDDK NIH HHS R01 DK106593NIDDK NIH HHS R01DK106593NIDDK NIH HHS U24 DK062429NIDDK NIH HHS U24DK062429NIEHS NIH HHS R01 ES029212
6 · The paper itself

Abstract

To further explore genetic links between complex traits, we developed a comprehensive framework to harmonize and integrate extensive genotype and phenotype data from the four well-characterized cohorts with the focus on cardiometabolic diseases deposited to the database of Genotypes and Phenotypes (dbGaP). We generated a series of polygenic risk scores (PRS) to investigate pleiotropic effects of loci that confer genetic risk for 19 common diseases and traits on body height, type 2 diabetes (T2D), and myocardial infarction (MI). In a meta-analysis of 20,021 subjects, we identified shared genetic determinants of Crohn's Disease (CD), a type of inflammatory bowel disease, and body height (p = 5.5 × 10

Indexed as

Genetic Predisposition to DiseaseAdultBody HeightChildCrohn DiseaseDatabases, GeneticDiabetes Mellitus, Type 2FemaleGene Expression RegulationHumansImmune Checkpoint ProteinsImmunity, InnateIntercellular Signaling Peptides and ProteinsMaleMultifactorial InheritanceMyocardial InfarctionImmune Checkpoint ProteinsIntercellular Signaling Peptides and Proteins

Identifiers

PMID33452914
PMCPMC8102349
OpenAlexW3125359194

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.