Evidence map›Paper›PMID 33483632›Full record

ArticleCommunications biology2021

AAV1 is the optimal viral vector for optogenetic experiments in pigeons (Columba livia).

Noemi Rook, John Michael Tuff, Sevim Isparta, Olivia Andrea Masseck, Stefan Herlitze, Onur Güntürkün, Roland Pusch

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Adeno-associated viruses for efficient gene expression in the axolotl nervous system.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Genomic loss of GPR108 disrupts AAV transduction in birds.bioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Balanced anesthesia in pigeons (Frontiers in physiology · 2024
    Article
  11. Article
  12. Article
  13. Review
  14. Molecular biology of serotonergic systems in avian brains.Frontiers in molecular neuroscience · 2023
    Review
  15. Article
  16. Article
  17. Article
  18. Red Light Optogenetics in Neuroscience.Frontiers in cellular neuroscience · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Noemi RookDepartment of Biopsychology, Institute of Cognitive Neuroscience, Faculty of Psychology, Ruhr University Bochum, Universitätsstraße 150, 44801, Bochum, Germany. noemi.rook@rub.de.ORCID http://orcid.org/0000-0002-2415-2813
John Michael TuffDepartment of Biopsychology, Institute of Cognitive Neuroscience, Faculty of Psychology, Ruhr University Bochum, Universitätsstraße 150, 44801, Bochum, Germany.
Sevim IspartaDepartment of Biopsychology, Institute of Cognitive Neuroscience, Faculty of Psychology, Ruhr University Bochum, Universitätsstraße 150, 44801, Bochum, Germany.ORCID http://orcid.org/0000-0002-1575-7861
Olivia Andrea MasseckUniversity of Bremen, Synthetic Biology, Leobener Straße 5, 28359, Bremen, Germany.ORCID http://orcid.org/0000-0002-1541-2388
Stefan HerlitzeDepartment of General Zoology and Neurobiology, Ruhr University Bochum, Universitätsstraße 150, 44801, Bochum, Germany.
Onur GüntürkünDepartment of Biopsychology, Institute of Cognitive Neuroscience, Faculty of Psychology, Ruhr University Bochum, Universitätsstraße 150, 44801, Bochum, Germany.
Roland PuschDepartment of Biopsychology, Institute of Cognitive Neuroscience, Faculty of Psychology, Ruhr University Bochum, Universitätsstraße 150, 44801, Bochum, Germany.
Ruhr University Bochum · DEAnkara University · TRUniversity Hospitals of the Ruhr-University of Bochum · DEUniversity of Bremen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although optogenetics has revolutionized rodent neuroscience, it is still rarely used in other model organisms as the efficiencies of viral gene transfer differ between species and comprehensive viral transduction studies are rare. However, for comparative research, birds offer valuable model organisms as they have excellent visual and cognitive capabilities. Therefore, the following study establishes optogenetics in pigeons on histological, physiological, and behavioral levels. We show that AAV1 is the most efficient viral vector in various brain regions and leads to extensive anterograde and retrograde ChR2 expression when combined with the CAG promoter. Furthermore, transient optical stimulation of ChR2 expressing cells in the entopallium decreases pigeons' contrast sensitivity during a grayscale discrimination task. This finding demonstrates causal evidence for the involvement of the entopallium in contrast perception as well as a proof of principle for optogenetics in pigeons and provides the groundwork for various other methods that rely on viral gene transfer in birds.

Indexed as

DependovirusOptogeneticsAnimalsChannelrhodopsinsColumbidaeTelencephalonChannelrhodopsins

Identifiers

PMID33483632
PMCPMC7822860
OpenAlexW3123319022

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.